Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC063952.1-203ENST00000634410 658 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 OR9G4-201ENST00000302957 984 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 RN7SKP160-201ENST00000363804 340 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 RNU1-149P-201ENST00000390870 161 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 HSPA8P15-201ENST00000401676 786 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC016772.1-201ENST00000444170 1261 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 CBX1P5-201ENST00000475330 559 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AP000797.2-201ENST00000475768 606 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 UBA52P7-201ENST00000486088 380 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 RPS12P31-201ENST00000491419 398 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC027026.1-201ENST00000532323 742 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 NMNAT1P5-201ENST00000559657 841 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 CYP4F35P-202ENST00000636121 390 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DQB2P05538 SAMMSON-209ENST00000641222 1100 ntBASIC5.4□□□□□ -1.54
HLA-DQB2P05538 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 OR55B1P-203ENST00000641518 2602 ntBASIC5.4□□□□□ -1.55
HLA-DQB2P05538 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HLA-DQB2P05538 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 NLRP3P1-201ENST00000622303 1785 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 RNU1-19P-201ENST00000363306 165 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 RNU1-146P-201ENST00000364015 165 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 MIR105-1-201ENST00000385222 81 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 RPL7L1P9-201ENST00000431298 745 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 CFL1P1-202ENST00000432948 411 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC090018.1-201ENST00000434369 367 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 SPRYD7P1-201ENST00000443861 570 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC011225.1-201ENST00000457751 369 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AL133445.1-201ENST00000467051 452 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 RPL7P41-201ENST00000485823 957 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 EIF3LP3-201ENST00000495197 822 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms