Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 SNORD56.6-201ENST00000384569 71 ntBASIC5.28□□□□□ -1.56
TNFP01375 MIR105-1-201ENST00000385222 81 ntBASIC5.28□□□□□ -1.56
TNFP01375 MIR765-201ENST00000390226 114 ntBASIC5.28□□□□□ -1.56
TNFP01375 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TNFP01375 OR4K12P-201ENST00000406538 961 ntBASIC5.28□□□□□ -1.56
TNFP01375 DUTP5-201ENST00000406790 469 ntBASIC5.28□□□□□ -1.56
TNFP01375 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.28□□□□□ -1.56
TNFP01375 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.28□□□□□ -1.56
TNFP01375 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.28□□□□□ -1.56
TNFP01375 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.28□□□□□ -1.56
TNFP01375 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 AL389915.2-201ENST00000454576 441 ntBASIC5.28□□□□□ -1.56
TNFP01375 AL035090.1-201ENST00000454835 332 ntBASIC5.28□□□□□ -1.56
TNFP01375 RPSAP50-201ENST00000481955 852 ntBASIC5.28□□□□□ -1.56
TNFP01375 RPS4XP20-201ENST00000505751 772 ntBASIC5.28□□□□□ -1.56
TNFP01375 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 YWHABP2-201ENST00000540201 713 ntBASIC5.28□□□□□ -1.56
TNFP01375 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.28□□□□□ -1.56
TNFP01375 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 AC005252.1-201ENST00000604518 1063 ntBASIC5.28□□□□□ -1.56
TNFP01375 AC009163.6-201ENST00000612367 342 ntBASIC5.28□□□□□ -1.56
TNFP01375 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
TNFP01375 MIR6730-201ENST00000622213 67 ntBASIC5.28□□□□□ -1.56
TNFP01375 AC063952.1-203ENST00000634410 658 ntBASIC5.28□□□□□ -1.56
TNFP01375 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TNFP01375 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFP01375 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 U3.2-201ENST00000362981 210 ntBASIC5.27□□□□□ -1.57
TNFP01375 U8.4-201ENST00000363626 134 ntBASIC5.27□□□□□ -1.57
TNFP01375 SNORA58B-201ENST00000364259 136 ntBASIC5.27□□□□□ -1.57
TNFP01375 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 AL645927.1-201ENST00000396783 406 ntBASIC5.27□□□□□ -1.57
TNFP01375 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 AC007394.1-201ENST00000421941 531 ntBASIC5.27□□□□□ -1.57
TNFP01375 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 RPS27P18-201ENST00000431701 247 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 AC073072.2-201ENST00000447425 348 ntBASIC5.27□□□□□ -1.57
TNFP01375 RPL7P6-201ENST00000480903 738 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC004453.1-201ENST00000487895 408 ntBASIC5.27□□□□□ -1.57
TNFP01375 GLUD1P3-202ENST00000508551 200 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFP01375 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TNFP01375 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFP01375 MIR3691-201ENST00000578066 90 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFP01375 AC008536.1-201ENST00000602872 669 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC095055.1-201ENST00000603472 1113 ntBASIC5.27□□□□□ -1.57
TNFP01375 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFP01375 AL078621.3-201ENST00000623707 2042 ntBASIC5.27□□□□□ -1.57
TNFP01375 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TNFP01375 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 AC007342.5-201ENST00000571340 2142 ntBASIC5.27□□□□□ -1.57
TNFP01375 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFP01375 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFP01375 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 U3.10-201ENST00000364459 214 ntBASIC5.26□□□□□ -1.57
TNFP01375 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms