Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 AL133243.2-201ENST00000610331 1621 ntBASIC5.56□□□□□ -1.52
LDLRP01130 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 AL034546.1-201ENST00000623740 3693 ntBASIC5.56□□□□□ -1.52
LDLRP01130 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 OR10R3P-201ENST00000361688 942 ntBASIC5.56□□□□□ -1.52
LDLRP01130 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
LDLRP01130 RNU105B-201ENST00000364478 208 ntBASIC5.56□□□□□ -1.52
LDLRP01130 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 U3.23-201ENST00000391132 200 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 PCBP2P1-201ENST00000437262 977 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AL500527.1-201ENST00000448532 255 ntBASIC5.56□□□□□ -1.52
LDLRP01130 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 RPL32P9-201ENST00000487963 407 ntBASIC5.56□□□□□ -1.52
LDLRP01130 EIF3LP3-201ENST00000495197 822 ntBASIC5.56□□□□□ -1.52
LDLRP01130 COL6A4P2-205ENST00000509855 506 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.56□□□□□ -1.52
LDLRP01130 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.56□□□□□ -1.52
LDLRP01130 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.56□□□□□ -1.52
LDLRP01130 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.56□□□□□ -1.52
LDLRP01130 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.56□□□□□ -1.52
LDLRP01130 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.56□□□□□ -1.52
LDLRP01130 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.56□□□□□ -1.52
LDLRP01130 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.56□□□□□ -1.52
LDLRP01130 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 AC008833.1-201ENST00000611633 691 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AC007786.3-201ENST00000615154 596 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AC018445.2-201ENST00000622987 260 ntBASIC5.56□□□□□ -1.52
LDLRP01130 AC020923.1-201ENST00000624021 917 ntBASIC5.56□□□□□ -1.52
LDLRP01130 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LDLRP01130 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
LDLRP01130 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
LDLRP01130 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
LDLRP01130 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 AC011933.2-201ENST00000578539 2790 ntBASIC5.55□□□□□ -1.52
LDLRP01130 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LDLRP01130 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LDLRP01130 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 RNU1-150P-201ENST00000362491 162 ntBASIC5.55□□□□□ -1.52
LDLRP01130 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 RPS3AP2-201ENST00000407190 754 ntBASIC5.55□□□□□ -1.52
LDLRP01130 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 AC245060.4-201ENST00000413293 1121 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AC096644.3-201ENST00000416788 338 ntBASIC5.55□□□□□ -1.52
LDLRP01130 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 KIF4CP-201ENST00000422742 1279 ntBASIC5.55□□□□□ -1.52
LDLRP01130 MTND2P11-201ENST00000423638 648 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 OR3D1P-201ENST00000438288 955 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 PFN1P6-201ENST00000476786 399 ntBASIC5.55□□□□□ -1.52
LDLRP01130 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.55□□□□□ -1.52
LDLRP01130 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.55□□□□□ -1.52
LDLRP01130 AC091078.2-201ENST00000557145 559 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 AC027216.1-201ENST00000577726 685 ntBASIC5.55□□□□□ -1.52
LDLRP01130 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRP01130 COX6CP7-201ENST00000597056 208 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AL391001.1-201ENST00000602747 715 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms