Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 MIR323A-201ENST00000362199 86 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AC017078.1-201ENST00000416146 368 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 AC009506.2-201ENST00000420635 840 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS4BO75351 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS4BO75351 BRWD1P3-201ENST00000428816 390 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 ARF4P4-201ENST00000439608 520 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 RN7SL352P-201ENST00000466002 277 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 AP001636.2-201ENST00000525517 696 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AL133399.1-201ENST00000527476 298 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 DUXAP5-201ENST00000529668 529 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VPS4BO75351 AL132857.1-201ENST00000555180 708 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL121839.1-201ENST00000556233 1185 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL049779.3-201ENST00000557141 606 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 HMGN2P47-201ENST00000559378 272 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 AC026898.1-201ENST00000586404 571 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 AC020916.2-201ENST00000591242 360 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS4BO75351 AL022067.1-201ENST00000602426 454 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AL583832.1-201ENST00000603227 784 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 MIR6886-201ENST00000619864 61 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 AP000676.4-201ENST00000624659 623 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 AC019226.2-201ENST00000625973 424 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AL121768.1-201ENST00000613917 2544 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 CR788268.1-201ENST00000603931 1809 ntBASIC6.01□□□□□ -1.45
VPS4BO75351 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS4BO75351 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS4BO75351 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VPS4BO75351 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
VPS4BO75351 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 AL359715.4-201ENST00000606629 1436 ntBASIC6□□□□□ -1.45
VPS4BO75351 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 LYARP1-201ENST00000436977 1501 ntBASIC6□□□□□ -1.45
VPS4BO75351 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS4BO75351 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 ZNF29P-201ENST00000225587 168 ntBASIC6□□□□□ -1.45
VPS4BO75351 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS4BO75351 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 SNORA17A-201ENST00000391185 133 ntBASIC6□□□□□ -1.45
VPS4BO75351 AC003045.1-201ENST00000398779 713 ntBASIC6□□□□□ -1.45
VPS4BO75351 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 GSTA12P-201ENST00000402398 508 ntBASIC6□□□□□ -1.45
VPS4BO75351 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 XKRYP1-201ENST00000423438 492 ntBASIC6□□□□□ -1.45
VPS4BO75351 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 XKRYP2-201ENST00000432915 492 ntBASIC6□□□□□ -1.45
VPS4BO75351 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 AL031313.1-201ENST00000448435 256 ntBASIC6□□□□□ -1.45
VPS4BO75351 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 RPL23AP60-201ENST00000450011 454 ntBASIC6□□□□□ -1.45
VPS4BO75351 NPM1P19-201ENST00000450070 712 ntBASIC6□□□□□ -1.45
VPS4BO75351 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 snoU13.29-201ENST00000459370 104 ntBASIC6□□□□□ -1.45
VPS4BO75351 RPSAP39-201ENST00000467439 883 ntBASIC6□□□□□ -1.45
VPS4BO75351 RN7SL326P-201ENST00000477493 296 ntBASIC6□□□□□ -1.45
VPS4BO75351 AC005412.2-201ENST00000492004 341 ntBASIC6□□□□□ -1.45
VPS4BO75351 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms