Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.54□□□□□ -1.52
RIPK2O43353 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.54□□□□□ -1.52
RIPK2O43353 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 AC023194.2-201ENST00000465398 406 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 SNRPCP11-201ENST00000492453 205 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 AC018639.1-201ENST00000492994 442 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.54□□□□□ -1.52
RIPK2O43353 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 RNU4-18P-201ENST00000516751 149 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.54□□□□□ -1.52
RIPK2O43353 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.54□□□□□ -1.52
RIPK2O43353 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK2O43353 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 AL512413.1-201ENST00000606489 382 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 SNORA35B-201ENST00000607417 129 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 MIR6721-201ENST00000617181 87 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 RBPJP2-201ENST00000618187 1444 ntBASIC5.54□□□□□ -1.52
RIPK2O43353 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK2O43353 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.54□□□□□ -1.52
RIPK2O43353 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK2O43353 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 MIR551B-201ENST00000384984 96 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 NDUFS5P5-201ENST00000437256 321 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 PPIAP27-201ENST00000453800 265 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 RPL29P23-201ENST00000486188 442 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 LDHAP1-201ENST00000509421 992 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 RNU2-45P-201ENST00000516068 187 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 AC116917.1-201ENST00000520558 305 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RIPK2O43353 AC084121.1-201ENST00000533882 835 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 DPPA2P4-201ENST00000563717 878 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK2O43353 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 MIR6839-201ENST00000620425 113 ntBASIC5.53□□□□□ -1.52
RIPK2O43353 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK2O43353 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.53□□□□□ -1.52
RIPK2O43353 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK2O43353 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RIPK2O43353 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms