Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 TRIM51GP-201ENST00000534741 1350 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RNA5SP510-201ENST00000364697 99 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RNA5SP284-201ENST00000384547 118 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RPL21P67-201ENST00000402896 478 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 NPM1P37-201ENST00000403105 874 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AL133388.1-201ENST00000404509 287 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 GABARAPL3-201ENST00000412799 354 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RPL24P2-201ENST00000421023 475 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC105399.1-202ENST00000447303 205 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 NOP56P2-201ENST00000447491 769 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC094085.1-201ENST00000468914 584 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RPL7P41-201ENST00000485823 957 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AL049874.2-201ENST00000492636 288 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 MYL12BP2-201ENST00000503948 512 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC005341.1-201ENST00000571086 708 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 MIR4505-201ENST00000582238 73 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 MIR4660-201ENST00000583549 74 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 AP000473.2-201ENST00000602659 1537 ntBASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 MUC2-202ENST00000613187 4845 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC073136.1-201ENST00000449426 2884 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 OR9K1P-201ENST00000326513 941 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 OR4K12P-201ENST00000406538 961 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AL358178.1-201ENST00000407698 397 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 PRUNEP1-201ENST00000425846 705 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC064862.4-201ENST00000442180 334 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC245028.2-201ENST00000458673 253 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC108161.1-201ENST00000461060 402 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC007998.1-201ENST00000474156 672 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 CBX1P5-201ENST00000475330 559 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 RN7SL814P-201ENST00000487715 300 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC022360.1-201ENST00000521058 340 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC112191.2-201ENST00000522428 333 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 SMG1P7-201ENST00000565246 2704 ntBASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAV27A0A087WT01 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms