Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ATP5A1P8-201ENST00000423669 1291 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC093698.1-201ENST00000423843 571 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL445928.1-201ENST00000435545 222 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 BTG3P1-201ENST00000435859 716 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC073346.1-201ENST00000441928 651 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 RPS16P9-201ENST00000477220 427 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 ACA64.6-201ENST00000516310 117 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC092851.1-201ENST00000535964 478 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 OR11H3P-201ENST00000554547 982 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC007424.1-203ENST00000554613 687 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC068446.3-201ENST00000555285 382 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 OR11J2P-201ENST00000555298 907 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 NDUFB4P11-201ENST00000560510 395 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC009101.1-201ENST00000568135 242 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 RN7SL716P-201ENST00000580539 268 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 RN7SL220P-201ENST00000581978 300 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 RPL35AP25-201ENST00000584631 330 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL109936.2-201ENST00000605350 650 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC023813.4-201ENST00000607580 580 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC012640.3-201ENST00000607847 430 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL731533.2-201ENST00000607898 578 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC022106.1-201ENST00000612834 766 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC135068.5-201ENST00000624197 983 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC126474.2-201ENST00000623268 1750 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 AC005702.3-201ENST00000585345 1447 ntBASIC2.68□□□□□ -1.98
LINC01558Q9Y6Z2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AC027279.1-201ENST00000568885 4284 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AC027287.1-201ENST00000553115 1453 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AC097504.1-201ENST00000515103 2415 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 SNORA66-201ENST00000384792 133 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AL035079.1-201ENST00000405210 287 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 RPS3AP2-201ENST00000407190 754 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 CALM2-202ENST00000409563 770 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AL450992.3-201ENST00000413192 568 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 RPSAP35-201ENST00000413753 818 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AC083862.1-201ENST00000427378 1242 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 RPS29P14-201ENST00000431518 171 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 CLUHP1-201ENST00000435012 1190 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 PPIAP17-201ENST00000438507 471 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 SOCS5P1-201ENST00000440415 949 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 FABP3P2-201ENST00000453169 399 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 AL663058.1-201ENST00000453379 353 ntBASIC2.67□□□□□ -1.98
LINC01558Q9Y6Z2 HIGD1AP8-201ENST00000453927 274 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms