Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC005294.1-201ENST00000355509 281 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 RNU1-146P-201ENST00000364015 165 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC099670.2-201ENST00000435130 321 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 MTND2P40-201ENST00000436718 841 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 GTF2F2P1-201ENST00000511083 675 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 RNA5SP373-201ENST00000517271 95 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC015720.2-201ENST00000567709 334 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC005377.1-201ENST00000605126 456 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 MIR7155-201ENST00000615925 56 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AL031658.2-201ENST00000616850 651 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC073869.8-201ENST00000641806 335 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 RPL11P3-201ENST00000395256 523 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 IGLV2-34-201ENST00000490007 283 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 RN7SL808P-201ENST00000496066 299 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AC072052.1-201ENST00000496556 306 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AP003080.1-202ENST00000526526 915 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AP005432.2-201ENST00000608162 586 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AL138960.1-201ENST00000613838 513 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AC007786.3-201ENST00000615154 596 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 MTCO1P1-201ENST00000624263 1081 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 CR383656.5-201ENST00000547616 1340 ntBASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.84□□□□□ -1.63
KIAA1549Q9HCM3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC004076.2-201ENST00000620532 3323 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 RNA5SP507-201ENST00000363603 121 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AL589647.1-201ENST00000402485 466 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC068138.1-201ENST00000412635 217 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 Z80107.2-201ENST00000445127 392 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC058823.1-201ENST00000485315 474 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 RN7SL30P-201ENST00000488416 306 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 H3F3BP2-201ENST00000583907 357 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 AC037198.3-201ENST00000616754 526 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 LINC01739-205ENST00000641890 573 ntBASIC4.84□□□□□ -1.64
KIAA1549Q9HCM3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AC092747.4-201ENST00000620519 1861 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AP005435.3-201ENST00000531260 3198 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms