Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AP001029.2-203ENST00000589795 4910 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 RNA5SP510-201ENST00000364697 99 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 SNORA5.1-201ENST00000384275 131 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 MRPS21P2-201ENST00000424704 264 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AL596266.1-201ENST00000448132 400 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 ABCC13-202ENST00000463099 3842 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 SEPT7P6-201ENST00000469999 1143 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 DUTP7-201ENST00000507982 486 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AP001496.3-201ENST00000580230 913 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 MIR7853-201ENST00000584820 132 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC009237.13-201ENST00000603193 276 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC015982.1-201ENST00000608113 465 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC080188.3-201ENST00000624842 748 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC087565.3-203ENST00000641018 837 ntBASIC5.77□□□□□ -1.49
PCDH9Q9HC56 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 PROS2P-201ENST00000474651 1951 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 GAPDHP24-201ENST00000328713 983 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 RN7SKP69-201ENST00000365390 305 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 HMGB1P20-201ENST00000402555 677 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 RNU2-72P-201ENST00000411175 163 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 RPS6P23-201ENST00000413224 722 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC079809.1-201ENST00000415468 276 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 VTI1BP4-201ENST00000427516 527 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL136231.1-201ENST00000429407 730 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 IGBP1P3-201ENST00000447449 1000 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AZGP1P2-201ENST00000454506 345 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 RPS23P6-201ENST00000466136 431 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 SNRPCP3-201ENST00000474888 476 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC117394.1-201ENST00000477323 567 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC135999.1-201ENST00000478962 479 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 PSMA2P2-201ENST00000504319 686 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC021106.1-201ENST00000509020 1058 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 SNORD46.2-201ENST00000516021 102 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC079064.1-201ENST00000528365 362 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 HMGB1P42-201ENST00000532126 553 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 DPPA2P4-201ENST00000563717 878 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL359715.3-201ENST00000569267 2123 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC027216.1-201ENST00000577726 685 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL022394.1-201ENST00000606979 292 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC117490.2-201ENST00000610042 594 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC104307.1-201ENST00000616142 196 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms