Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 PGAM1P13-201ENST00000507497 754 ntBASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 AC021106.1-201ENST00000509020 1058 ntBASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 OR10G5P-201ENST00000532733 358 ntBASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 AL121612.2-201ENST00000612261 482 ntBASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 OR52B5P-202ENST00000641118 1110 ntBASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RPAP1Q9BWH6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 CDY3P-201ENST00000454543 1618 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 NPM1P37-201ENST00000403105 874 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AL390774.1-201ENST00000411924 246 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 RPL7L1P9-201ENST00000431298 745 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 RN7SL197P-201ENST00000466981 299 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 RN7SL447P-201ENST00000494711 245 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 OR4A17P-201ENST00000526032 904 ntBASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RPAP1Q9BWH6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 MRRFP1-201ENST00000435941 1675 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC104964.3-201ENST00000606115 2860 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 U8.4-201ENST00000363626 134 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC108075.1-201ENST00000424692 529 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 NIPA2P1-201ENST00000426223 976 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC092106.1-201ENST00000444291 373 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 OTX2P1-201ENST00000450956 354 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 RPS4XP1-201ENST00000482189 787 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 NDUFA5P12-201ENST00000503796 343 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AL583832.1-201ENST00000603227 784 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC024940.4-201ENST00000605507 246 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC116651.1-201ENST00000609724 556 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 WBP1LP8-201ENST00000617401 327 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 AC137056.2-201ENST00000624055 1958 ntBASIC6.66□□□□□ -1.34
RPAP1Q9BWH6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 MT-RNR2-201ENST00000387347 1559 ntBASIC6.65□□□□□ -1.34
RPAP1Q9BWH6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 SNORA70.6-201ENST00000383934 134 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 RNU1-77P-201ENST00000390868 162 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 RPSAP35-201ENST00000413753 818 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 RIMKLBP2-201ENST00000424737 654 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC005033.1-201ENST00000428904 813 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AZGP1P2-201ENST00000454506 345 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC022832.1-201ENST00000530718 645 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms