Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 HMGN1P36-201ENST00000446623 298 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 PSAT1P4-201ENST00000466500 526 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 EIF3LP3-201ENST00000495197 822 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 ASNSP4-201ENST00000511103 447 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 OR5AM1P-201ENST00000532136 1032 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 HSPE1P2-201ENST00000554777 306 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC010547.6-201ENST00000571789 193 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 MIR4311-201ENST00000580794 100 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AL357153.4-201ENST00000620487 1016 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 HSPA8P14-201ENST00000552265 1805 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC005261.2-201ENST00000593427 4258 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 SRRM1P3-201ENST00000426911 2678 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 TMSB4XP4-201ENST00000323496 618 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 GAPDHP24-201ENST00000328713 983 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC016769.2-201ENST00000414815 475 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 Z84478.1-201ENST00000438230 1219 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 SUMO2P3-201ENST00000438311 288 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 AL450996.1-201ENST00000445574 1202 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 IGBP1P3-201ENST00000447449 1000 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 RN7SL188P-201ENST00000469842 285 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 PPIAP19-201ENST00000486414 492 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC021733.2-201ENST00000518830 497 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC135626.1-201ENST00000556983 435 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 MIR3614-201ENST00000581261 86 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 FAM72A-208ENST00000607379 1139 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 OR51C1P-201ENST00000608504 942 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC026124.2-201ENST00000621847 656 ntBASIC5.2□□□□□ -1.58
COL21A1Q96P44 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL21A1Q96P44 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL21A1Q96P44 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL031595.2-201ENST00000624215 19071 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 RNA5SP131-201ENST00000365452 119 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 CDY17P-201ENST00000414121 1282 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 RIMKLBP2-201ENST00000424737 654 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC104843.2-201ENST00000427666 297 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 RPL7P56-201ENST00000429441 717 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 NDUFB4P8-201ENST00000435351 367 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC002504.1-201ENST00000438281 691 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC073465.2-201ENST00000440938 498 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL161636.2-201ENST00000445179 927 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 EEF1B2P6-201ENST00000445713 673 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL596266.1-201ENST00000448132 400 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 GAPDHP14-201ENST00000450472 937 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms