Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.79□□□□□ -1
TOPBP1Q92547 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 RPL26P30-202ENST00000602923 645 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 AC073869.8-201ENST00000641806 335 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.79□□□□□ -1
TOPBP1Q92547 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.78□□□□□ -1
TOPBP1Q92547 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.78□□□□□ -1
TOPBP1Q92547 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
TOPBP1Q92547 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 AC144833.1-201ENST00000567953 4089 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.78□□□□□ -1
TOPBP1Q92547 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.78□□□□□ -1
TOPBP1Q92547 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC8.78□□□□□ -1
TOPBP1Q92547 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.78□□□□□ -1
TOPBP1Q92547 RPL7P40-201ENST00000481703 745 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 AC011005.3-201ENST00000491624 395 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 AC012400.1-201ENST00000518452 381 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.78□□□□□ -1
TOPBP1Q92547 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC8.78□□□□□ -1
TOPBP1Q92547 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.78□□□□□ -1
TOPBP1Q92547 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.78□□□□□ -1
TOPBP1Q92547 AC105254.2-201ENST00000603636 436 ntBASIC8.78□□□□□ -1
TOPBP1Q92547 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
TOPBP1Q92547 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TOPBP1Q92547 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
TOPBP1Q92547 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 SNORA70H-201ENST00000383910 135 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 SNORA70J-201ENST00000384182 135 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 RPS3AP23-201ENST00000401762 784 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 RN7SL188P-201ENST00000469842 285 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC111000.3-201ENST00000508057 576 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 ASB8-204ENST00000536071 568 ntTSL 4 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC245389.2-201ENST00000616023 576 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC242843.1-201ENST00000618702 573 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC005725.1-201ENST00000577346 2607 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 AC022164.1-201ENST00000568767 2673 ntBASIC8.77□□□□□ -1.01
TOPBP1Q92547 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOPBP1Q92547 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 HSPA8P15-201ENST00000401676 786 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 AC024451.1-201ENST00000508013 779 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 OR52H1-202ENST00000641796 1061 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 NBPF8-201ENST00000583271 5330 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 RAD17P2-201ENST00000451754 1977 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 AC011933.2-201ENST00000578539 2790 ntBASIC8.76□□□□□ -1.01
TOPBP1Q92547 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.76□□□□□ -1.01
TOPBP1Q92547 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOPBP1Q92547 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 PARP1P2-201ENST00000556806 195 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC244107.2-201ENST00000611773 76 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC135068.12-201ENST00000637370 931 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms