Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL355488.2-201ENST00000609909 2850 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 PPBPP2-201ENST00000513150 1362 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 RPL11P3-201ENST00000395256 523 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL034417.1-201ENST00000399343 800 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 HYALP1-201ENST00000417674 1279 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 GAPDHP48-201ENST00000436626 961 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 RPL7P33-201ENST00000444159 742 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 BUD31P2-201ENST00000449374 300 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 KF459542.1-201ENST00000450908 553 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 HMGB1P7-201ENST00000450921 612 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 Z83838.1-202ENST00000456225 839 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 RN7SKP238-201ENST00000516483 249 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC021451.1-201ENST00000523498 1129 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 OR4A17P-201ENST00000526032 904 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC091078.2-201ENST00000557145 559 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AGGF1P5-201ENST00000567900 919 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC112503.1-201ENST00000608436 391 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC015712.7-201ENST00000615211 635 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 HTR1DP1-201ENST00000616500 888 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL035661.1-201ENST00000620459 1144 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC111152.1-202ENST00000635848 339 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AL590396.4-201ENST00000636779 956 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AP001153.1-201ENST00000641024 338 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC092451.3-201ENST00000625067 1343 ntBASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ATG4AQ8WYN0 AC139426.3-201ENST00000605648 2059 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 RN7SKP250-201ENST00000363924 321 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AL158050.1-201ENST00000416077 457 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 BMS1P13-201ENST00000417301 885 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 THEM7P-201ENST00000419556 672 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 BX276092.6-201ENST00000430476 250 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC007563.3-201ENST00000433233 371 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 MTCYBP11-201ENST00000447254 1109 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 BX276092.8-201ENST00000455722 250 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 PPM1AP1-201ENST00000502740 1135 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC021146.5-201ENST00000503544 545 ntBASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4AQ8WYN0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms