Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC133794.1-201ENST00000602731 914 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC008115.3-201ENST00000614874 549 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AL138955.1-201ENST00000622881 1040 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 HSPA8P19-201ENST00000505359 1517 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 OR4K17-201ENST00000315543 1032 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 NME1P1-201ENST00000420914 382 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ELOCP6-201ENST00000429066 328 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL512637.2-201ENST00000431287 1256 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 DEFA9P-201ENST00000433042 285 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ELOCP12-201ENST00000458706 328 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 RN7SL184P-201ENST00000488308 297 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 RN7SL205P-201ENST00000490174 284 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC034244.2-201ENST00000514668 858 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC112198.4-201ENST00000515450 351 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 BX510359.5-201ENST00000515651 304 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC145423.1-201ENST00000605712 336 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL159169.2-201ENST00000610061 1269 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 U1.34-201ENST00000618578 162 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 TCL6_3.1-201ENST00000619064 137 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC016583.1-201ENST00000624221 2431 ntBASIC5.91□□□□□ -1.46
HMGB4Q8WW32 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB4Q8WW32 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AL137141.1-201ENST00000624622 4836 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC132825.1-201ENST00000463573 2247 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC092692.1-201ENST00000623625 2595 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 BX284613.1-201ENST00000452221 1641 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 RN7SKP124-201ENST00000364730 341 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AL451142.1-201ENST00000375867 775 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 PTCD2P2-201ENST00000415579 1095 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 MTCO2P1-201ENST00000424648 477 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AL022331.1-201ENST00000429025 477 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms