Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 HSPE1P2-201ENST00000554777 306 ntBASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 AC092944.2-201ENST00000605443 889 ntBASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 AC005840.5-201ENST00000619166 599 ntBASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CLDND2Q8NHS1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLDND2Q8NHS1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CLDND2Q8NHS1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC125336.1-201ENST00000508893 2827 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC003985.2-201ENST00000562268 1669 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 RN7SKP28-201ENST00000364770 305 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC016769.2-201ENST00000414815 475 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 GAPDHP14-201ENST00000450472 937 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL450023.1-201ENST00000450868 751 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL606490.1-201ENST00000452266 765 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 RN7SL51P-201ENST00000468230 285 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 RN7SL583P-201ENST00000475692 287 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 DUTP1-201ENST00000493631 470 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL121594.2-201ENST00000541658 472 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 MIR1269B-201ENST00000580405 75 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 MIR4443-201ENST00000585052 53 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL513327.3-201ENST00000602618 469 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 IMMP1LP3-201ENST00000604197 224 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 SUGT1P3-202ENST00000604259 383 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AL353729.2-201ENST00000605859 1249 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC010245.2-201ENST00000606908 1167 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC004808.2-201ENST00000627965 773 ntBASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CLDND2Q8NHS1 AC011933.2-201ENST00000578539 2790 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC018809.2-201ENST00000602436 3823 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 MFSD8-239ENST00000641590 2479 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 U3.7-201ENST00000363668 216 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 RNA5SP234-201ENST00000363916 119 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 RNU4-2-201ENST00000365668 141 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC009804.1-201ENST00000400949 179 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC006335.2-201ENST00000437993 330 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC019185.1-201ENST00000442718 389 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC092106.1-201ENST00000444291 373 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 VDAC2P4-201ENST00000452925 711 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 MEMO1P4-201ENST00000453590 386 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 CBX1P2-201ENST00000453841 458 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 AC011225.1-201ENST00000457751 369 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 RN7SL799P-201ENST00000475891 298 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 UBA52P7-201ENST00000486088 380 ntBASIC4.7□□□□□ -1.66
CLDND2Q8NHS1 EIF1P7-201ENST00000487533 337 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms