Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 RN7SL329P-201ENST00000467740 299 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 TOMM22P4-201ENST00000511318 336 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 TPM3P3-201ENST00000521343 354 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 HMGN2P6-201ENST00000551091 273 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 TAS2R6P-201ENST00000605022 826 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AP002505.2-201ENST00000623585 696 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ABCC13-202ENST00000463099 3842 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AL807761.1-201ENST00000417622 171 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 NMD3P2-201ENST00000421815 761 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LDHAP2-201ENST00000437325 985 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 H3F3BP1-201ENST00000440551 403 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC007494.1-201ENST00000562293 760 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AL022394.1-201ENST00000606979 292 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 MAPK10-328ENST00000641553 4009 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC096775.1-201ENST00000437724 448 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC104634.1-201ENST00000452720 462 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC025674.1-201ENST00000507074 324 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 KCTD9P4-201ENST00000526766 1166 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 IGBP1P1-201ENST00000554337 1009 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC091193.1-201ENST00000604640 448 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 RNA5SP350-201ENST00000363298 111 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC068138.1-201ENST00000412635 217 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 MTND4LP17-201ENST00000414607 293 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 RPS27AP6-201ENST00000427962 448 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC092647.3-201ENST00000443044 633 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 GYG1P1-201ENST00000460864 698 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC007686.1-201ENST00000488511 463 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNE1Q8NF91 CASC19-222ENST00000641321 1173 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 AC004076.2-201ENST00000620532 3323 ntBASIC1.69□□□□□ -2.14
SYNE1Q8NF91 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 NCOA4P2-201ENST00000340589 1813 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 DUTP5-201ENST00000406790 469 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 FAR2P2-201ENST00000413041 594 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 SLC35E1P1-201ENST00000419313 864 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 FAR2P4-202ENST00000425399 584 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AL662874.1-201ENST00000426065 230 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 RPL36AP15-201ENST00000444514 266 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC105399.1-202ENST00000447303 205 ntBASIC1.68□□□□□ -2.14
SYNE1Q8NF91 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC1.68□□□□□ -2.14
SYNE1Q8NF91 AC092905.1-201ENST00000467527 949 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms