Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC005225.5-201ENST00000623547 2225 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 FAM32BP-201ENST00000344033 333 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 ATG4AP1-201ENST00000416893 538 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC097721.1-201ENST00000427150 1253 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 TXNP2-201ENST00000443918 295 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AL513533.1-201ENST00000453728 415 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 MIR4737-201ENST00000583979 81 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AC010857.1-201ENST00000606398 594 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 AL161637.1-201ENST00000622380 412 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 Z98755.1-201ENST00000407015 1384 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 SNORA70.4-201ENST00000365509 134 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 RNA5SP171-201ENST00000391071 115 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 DBIP1-201ENST00000401435 260 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC009237.5-201ENST00000414271 501 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 CHIAP3-201ENST00000423668 1133 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 MRPS21P2-201ENST00000424704 264 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC093414.1-201ENST00000434712 514 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 AURKAPS2-201ENST00000454983 333 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 OR13C1P-201ENST00000457612 963 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 RN7SL352P-201ENST00000466002 277 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 IGKV2D-10-201ENST00000520194 281 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 OR5AM1P-201ENST00000532136 1032 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC139697.1-201ENST00000548429 745 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 THAP12P4-201ENST00000528321 2266 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 RNA5SP113-201ENST00000410486 84 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 CHEK2P3-201ENST00000416118 248 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 SCARNA16.4-201ENST00000516956 187 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 MIR5095-201ENST00000578844 88 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 AP003789.1-201ENST00000617737 605 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 MIR6830-201ENST00000636015 70 ntBASIC4.72□□□□□ -1.65
LRRK2Q5S007 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LRRK2Q5S007 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRK2Q5S007 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRRK2Q5S007 AL078621.3-201ENST00000623707 2042 ntBASIC4.71□□□□□ -1.65
LRRK2Q5S007 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms