Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Z83820.1-201ENST00000456978 1499 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC011503.2-201ENST00000594230 1500 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 MT-RNR2-201ENST00000387347 1559 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.9□□□□□ -1.62
CCDC58Q4VC31 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL159987.1-201ENST00000347911 293 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 RNA5SP30-201ENST00000365552 115 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 SNORA51.9-201ENST00000384295 124 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 SNORA79B-201ENST00000410557 148 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC234781.4-201ENST00000419384 244 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AK4P4-201ENST00000419465 646 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 NENFP1-201ENST00000419476 466 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 BX284632.2-201ENST00000421091 399 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC017019.1-201ENST00000426129 261 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC064862.5-201ENST00000440618 334 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL512605.1-202ENST00000441919 381 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL359955.2-201ENST00000445380 353 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC098847.1-201ENST00000473094 348 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC135999.1-201ENST00000478962 479 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 MYL12BP2-201ENST00000503948 512 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL158068.1-201ENST00000506116 616 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 DUTP7-201ENST00000507982 486 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 RNA5SP96-201ENST00000516041 107 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC113191.1-201ENST00000517759 403 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC108673.3-201ENST00000609183 335 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL365181.4-201ENST00000609800 547 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC015871.5-202ENST00000623252 701 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC022919.1-201ENST00000624979 626 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 OR51H2P-202ENST00000641424 3046 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 AC104623.2-202ENST00000623477 4002 ntBASIC4.9□□□□□ -1.63
CCDC58Q4VC31 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC58Q4VC31 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 LINC01355-201ENST00000566551 5444 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 RPS6P23-201ENST00000413224 722 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 MRPL53P1-201ENST00000414323 319 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC007161.1-204ENST00000423039 460 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC090804.1-201ENST00000448870 490 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC011225.1-201ENST00000457751 369 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC022795.1-201ENST00000473808 480 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC009120.1-201ENST00000493458 473 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 RPS24P16-201ENST00000497294 392 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 RNA5SP360-201ENST00000516555 118 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 SCARNA6.1-201ENST00000516989 238 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 TRIM51DP-201ENST00000529746 596 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC024940.3-201ENST00000538551 316 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC040958.1-201ENST00000561102 201 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 MTCYBP13-201ENST00000578634 1093 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms