Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 AL034417.1-201ENST00000399343 800 ntBASIC3.71□□□□□ -1.82
RPL39P62891 RPL10P10-201ENST00000403509 664 ntBASIC3.71□□□□□ -1.82
RPL39P62891 EEF1A1P29-201ENST00000416082 1096 ntBASIC3.71□□□□□ -1.82
RPL39P62891 OR5M12P-201ENST00000423388 929 ntBASIC3.71□□□□□ -1.82
RPL39P62891 OR2AH1P-201ENST00000425717 928 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC127526.2-201ENST00000426436 775 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 RPL12P17-201ENST00000432393 498 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.71□□□□□ -1.82
RPL39P62891 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 AC068228.1-201ENST00000461723 211 ntBASIC3.71□□□□□ -1.82
RPL39P62891 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.71□□□□□ -1.82
RPL39P62891 RBBP4P1-201ENST00000502424 1276 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 AC114781.3-201ENST00000512083 142 ntBASIC3.71□□□□□ -1.82
RPL39P62891 OR5H7P-201ENST00000514084 930 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.71□□□□□ -1.82
RPL39P62891 OR4A41P-201ENST00000533053 928 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AP004607.2-201ENST00000533949 322 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 CYCSP38-201ENST00000559840 322 ntBASIC3.71□□□□□ -1.82
RPL39P62891 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 MRPS21P7-201ENST00000566937 238 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC011840.5-201ENST00000582125 771 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.71□□□□□ -1.82
RPL39P62891 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.71□□□□□ -1.82
RPL39P62891 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 LSM1P2-201ENST00000604911 322 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AP001437.1-201ENST00000608783 456 ntBASIC3.71□□□□□ -1.82
RPL39P62891 BNIP3P41-202ENST00000616656 861 ntBASIC3.71□□□□□ -1.82
RPL39P62891 BX005214.3-202ENST00000619809 325 ntBASIC3.71□□□□□ -1.82
RPL39P62891 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.71□□□□□ -1.82
RPL39P62891 AC111152.1-202ENST00000635848 339 ntBASIC3.71□□□□□ -1.82
RPL39P62891 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RPL39P62891 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 AL731566.1-201ENST00000620490 1937 ntBASIC3.71□□□□□ -1.82
RPL39P62891 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 TCP1P3-201ENST00000414406 1498 ntBASIC3.71□□□□□ -1.82
RPL39P62891 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 AC022306.1-201ENST00000560489 1562 ntBASIC3.71□□□□□ -1.82
RPL39P62891 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 PCAT14-202ENST00000627127 3935 ntBASIC3.71□□□□□ -1.82
RPL39P62891 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.71□□□□□ -1.82
RPL39P62891 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
RPL39P62891 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 STX3-208ENST00000641815 3236 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 LYARP1-201ENST00000436977 1501 ntBASIC3.7□□□□□ -1.82
RPL39P62891 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL39P62891 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 RNA5SP477-201ENST00000362639 119 ntBASIC3.7□□□□□ -1.82
RPL39P62891 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RPL39P62891 MIR191-201ENST00000384873 92 ntBASIC3.7□□□□□ -1.82
RPL39P62891 MIR1203-201ENST00000408812 85 ntBASIC3.7□□□□□ -1.82
RPL39P62891 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL39P62891 BX119321.1-201ENST00000428912 797 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL39P62891 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 GAPDHP58-201ENST00000438477 1006 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AL356121.1-201ENST00000442911 156 ntBASIC3.7□□□□□ -1.82
RPL39P62891 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL39P62891 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL39P62891 AL035090.1-201ENST00000454835 332 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AC021006.1-201ENST00000489849 553 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 IGHVIII-11-1-201ENST00000522733 267 ntBASIC3.7□□□□□ -1.82
RPL39P62891 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.7□□□□□ -1.82
RPL39P62891 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.7□□□□□ -1.82
RPL39P62891 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL39P62891 PPATP2-201ENST00000605635 508 ntBASIC3.7□□□□□ -1.82
RPL39P62891 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL39P62891 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL39P62891 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL39P62891 AC104966.1-201ENST00000467010 1464 ntBASIC3.7□□□□□ -1.82
RPL39P62891 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms