Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLRN1P58418 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLRN1P58418 RNA5SP105-201ENST00000391123 113 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL139184.1-202ENST00000422303 222 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL157884.1-201ENST00000424561 454 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AC096632.2-201ENST00000438139 1239 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC118469.1-201ENST00000442943 488 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC097499.1-201ENST00000444277 208 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 WDR82P2-201ENST00000444540 928 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC010240.2-201ENST00000445363 1205 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 RPS7P11-201ENST00000484240 586 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC117532.1-201ENST00000514638 323 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 AP003461.1-201ENST00000528866 78 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC016180.1-201ENST00000567945 403 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC024267.2-201ENST00000582737 417 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC119751.7-201ENST00000600494 245 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL645933.2-201ENST00000606743 1207 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AC011374.2-201ENST00000607135 526 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 U91328.4-201ENST00000608919 517 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.71□□□□□ -1.5
CLRN1P58418 AL450489.1-201ENST00000612071 468 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 AL162574.1-201ENST00000615702 950 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.71□□□□□ -1.5
CLRN1P58418 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC011815.3-201ENST00000624194 473 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 VN2R3P-201ENST00000422626 1412 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AC104446.1-201ENST00000613728 1321 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 AC111188.2-201ENST00000529697 1387 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 AL022393.1-201ENST00000625142 1677 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLRN1P58418 SNORD16-201ENST00000362803 99 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 RNU1-87P-201ENST00000363727 170 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 RNU1-84P-201ENST00000365447 164 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 OOSP1-201ENST00000398992 1270 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AL121977.1-201ENST00000401636 979 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ERHP2-201ENST00000402323 299 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AL033519.1-201ENST00000407266 307 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 RN7SKP281-201ENST00000410472 352 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 U3.43-201ENST00000410734 213 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 UBE2V1P14-201ENST00000415815 558 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 Z75741.2-201ENST00000417272 1167 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC011233.1-201ENST00000422812 283 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.7□□□□□ -1.5
CLRN1P58418 UBE2D3P4-201ENST00000441973 436 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 MTND2P4-201ENST00000445034 1004 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC233982.1-201ENST00000451247 436 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC234781.3-201ENST00000452540 973 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.7□□□□□ -1.5
CLRN1P58418 AC073387.1-201ENST00000453261 709 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 RN7SL83P-201ENST00000468131 297 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 AC022730.1-201ENST00000473114 568 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 RPS4XP17-201ENST00000479057 754 ntBASIC5.7□□□□□ -1.5
CLRN1P58418 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms