Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN6P56747 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN6P56747 AC011840.5-201ENST00000582125 771 ntBASIC5.35□□□□□ -1.55
CLDN6P56747 MIR4480-201ENST00000582492 71 ntBASIC5.35□□□□□ -1.55
CLDN6P56747 AC025574.2-201ENST00000615621 514 ntBASIC5.35□□□□□ -1.55
CLDN6P56747 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN6P56747 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLDN6P56747 AC011933.2-201ENST00000578539 2790 ntBASIC5.35□□□□□ -1.55
CLDN6P56747 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDN6P56747 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN6P56747 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN6P56747 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN6P56747 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN6P56747 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 MSL3P1-202ENST00000440028 1468 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN6P56747 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CLDN6P56747 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN6P56747 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDN6P56747 OR4K12P-201ENST00000406538 961 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN6P56747 AC009784.1-201ENST00000426484 460 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC092017.2-201ENST00000427600 362 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN6P56747 GYG1P1-201ENST00000460864 698 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC128716.1-201ENST00000475129 166 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC083982.1-201ENST00000485679 344 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN6P56747 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN6P56747 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC090424.1-201ENST00000535243 736 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 CR383656.6-201ENST00000550518 394 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN6P56747 AP001267.4-201ENST00000602598 545 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 TAS2R6P-201ENST00000605022 826 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 AC012557.1-201ENST00000607115 611 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 uc_338.18-201ENST00000615451 175 ntBASIC5.34□□□□□ -1.55
CLDN6P56747 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN6P56747 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN6P56747 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN6P56747 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN6P56747 AL137058.3-201ENST00000624531 3099 ntBASIC5.34□□□□□ -1.56
CLDN6P56747 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN6P56747 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN6P56747 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN6P56747 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 AC112255.1-201ENST00000624070 2493 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN6P56747 SNORD1C-201ENST00000363315 78 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN6P56747 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 CYB5AP4-201ENST00000396692 399 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 RBMY2QP-201ENST00000429799 1147 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN6P56747 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 snoU13.20-201ENST00000459180 104 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 snoU13.29-201ENST00000459370 104 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AC074255.1-201ENST00000511259 501 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AP001922.4-201ENST00000526967 290 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN6P56747 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC079075.1-201ENST00000559543 878 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 RPL10P14-201ENST00000565265 298 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC104785.1-201ENST00000603220 588 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 AC009163.6-201ENST00000612367 342 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AC241377.1-201ENST00000619797 406 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CLDN6P56747 AL353796.1-201ENST00000561542 3241 ntBASIC5.33□□□□□ -1.56
CLDN6P56747 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CLDN6P56747 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN6P56747 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN6P56747 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms