Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 OR51A1P-201ENST00000511110 946 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 AC134349.2-201ENST00000535136 910 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 MIR3934-201ENST00000579806 107 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 OR7A8P-201ENST00000595427 913 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HMGCS2P54868 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.23□□□□□ -1.41
HMGCS2P54868 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HMGCS2P54868 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
HMGCS2P54868 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCS2P54868 AC073342.2-201ENST00000595842 1800 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AP001157.1-201ENST00000550837 2339 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCS2P54868 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCS2P54868 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 DNM1P47-203ENST00000571780 12667 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 RNA5SP123-201ENST00000363244 119 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AC136624.1-201ENST00000400791 413 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 HSPA8P15-201ENST00000401676 786 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 RIMKLBP2-201ENST00000424737 654 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AC104837.2-201ENST00000427236 424 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AL049745.1-201ENST00000433953 286 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCS2P54868 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCS2P54868 IGBP1P3-201ENST00000447449 1000 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 snoU13.20-201ENST00000459180 104 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 RPS3AP41-201ENST00000462701 778 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCS2P54868 PDCL3P4-201ENST00000489621 720 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 RPS17P5-201ENST00000498293 408 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCS2P54868 BRD9P1-201ENST00000529855 560 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCS2P54868 AC087783.2-201ENST00000605070 562 ntBASIC6.22□□□□□ -1.41
HMGCS2P54868 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCS2P54868 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCS2P54868 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCS2P54868 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCS2P54868 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HMGCS2P54868 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HMGCS2P54868 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCS2P54868 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCS2P54868 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCS2P54868 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCS2P54868 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCS2P54868 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 AC105233.1-201ENST00000498840 781 ntBASIC6.21□□□□□ -1.42
HMGCS2P54868 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCS2P54868 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCS2P54868 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCS2P54868 AP003789.1-201ENST00000617737 605 ntBASIC6.21□□□□□ -1.42
HMGCS2P54868 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCS2P54868 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HMGCS2P54868 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCS2P54868 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCS2P54868 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCS2P54868 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCS2P54868 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCS2P54868 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms