Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 MIR375-201ENST00000362103 64 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 SNORD56.6-201ENST00000384569 71 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 RPSAP35-201ENST00000413753 818 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CR1P49238 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CR1P49238 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CR1P49238 RN7SL168P-201ENST00000463821 279 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 MRE11P1-201ENST00000464884 2127 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 RN7SL649P-201ENST00000496974 275 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CR1P49238 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CX3CR1P49238 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CX3CR1P49238 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.86□□□□□ -1.63
CX3CR1P49238 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 VN1R81P-201ENST00000602085 372 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 SSXP3-201ENST00000442971 1300 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 AC112198.2-201ENST00000426589 6996 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 MAPK10-338ENST00000641647 3362 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
CX3CR1P49238 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CR1P49238 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 AC006206.1-201ENST00000544842 3387 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AC007342.5-201ENST00000571340 2142 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 AC083899.1-201ENST00000454465 3819 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
CX3CR1P49238 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CR1P49238 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CX3CR1P49238 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 OR7E156P-201ENST00000400303 464 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 RPS3AP2-201ENST00000407190 754 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 RNU2-22P-201ENST00000411266 212 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 PTP4A1P1-201ENST00000420539 515 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 NDUFB4P8-201ENST00000435351 367 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AZGP1P2-201ENST00000454506 345 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AGGF1P3-201ENST00000493675 1213 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AC006499.4-201ENST00000510947 694 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 MRPS16P1-201ENST00000523462 412 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 TRIM51DP-201ENST00000529746 596 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 TOMM20P1-201ENST00000534518 427 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CR1P49238 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 DPPA2P4-201ENST00000563717 878 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AL138895.2-201ENST00000603019 178 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AL713998.2-201ENST00000604538 1198 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AC067838.1-201ENST00000606064 577 ntBASIC4.85□□□□□ -1.63
CX3CR1P49238 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CR1P49238 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CR1P49238 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CX3CR1P49238 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CR1P49238 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CR1P49238 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CX3CR1P49238 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CX3CR1P49238 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 AL359715.3-201ENST00000569267 2123 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC003985.2-201ENST00000562268 1669 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CR1P49238 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms