Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDX1P47902 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CDX1P47902 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDX1P47902 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.86□□□□□ -1.63
CDX1P47902 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDX1P47902 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CDX1P47902 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
CDX1P47902 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 AC005005.4-201ENST00000623789 16698 ntBASIC4.85□□□□□ -1.63
CDX1P47902 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 RNU6-249P-201ENST00000363016 102 ntBASIC4.85□□□□□ -1.63
CDX1P47902 RN7SKP108-201ENST00000411367 328 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 UBE2V1P14-201ENST00000415815 558 ntBASIC4.85□□□□□ -1.63
CDX1P47902 MTND2P11-201ENST00000423638 648 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC130360.1-201ENST00000425489 1117 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC002069.1-201ENST00000429649 1159 ntBASIC4.85□□□□□ -1.63
CDX1P47902 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 OR3D1P-201ENST00000438288 955 ntBASIC4.85□□□□□ -1.63
CDX1P47902 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 AC023512.1-201ENST00000444513 499 ntBASIC4.85□□□□□ -1.63
CDX1P47902 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.85□□□□□ -1.63
CDX1P47902 RN7SL197P-201ENST00000466981 299 ntBASIC4.85□□□□□ -1.63
CDX1P47902 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC116562.1-201ENST00000485355 781 ntBASIC4.85□□□□□ -1.63
CDX1P47902 RPL34P33-201ENST00000486062 334 ntBASIC4.85□□□□□ -1.63
CDX1P47902 RPSAP51-201ENST00000497462 645 ntBASIC4.85□□□□□ -1.63
CDX1P47902 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.85□□□□□ -1.63
CDX1P47902 PRMT5P1-201ENST00000514351 598 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC130365.2-201ENST00000525882 1201 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.85□□□□□ -1.63
CDX1P47902 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC092332.1-201ENST00000563684 829 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 AC134669.1-201ENST00000581275 672 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AP005262.1-201ENST00000582646 997 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC008507.3-201ENST00000585753 472 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC060780.2-201ENST00000589047 198 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 DYNLL1P1-201ENST00000595442 269 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AL021368.3-201ENST00000607119 578 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 BNIP3P41-202ENST00000616656 861 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC006213.5-201ENST00000619673 288 ntBASIC4.85□□□□□ -1.63
CDX1P47902 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.85□□□□□ -1.63
CDX1P47902 AC116667.2-201ENST00000641075 823 ntBASIC4.85□□□□□ -1.63
CDX1P47902 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.85□□□□□ -1.63
CDX1P47902 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 HSPA8P17-201ENST00000427029 1382 ntBASIC4.85□□□□□ -1.63
CDX1P47902 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 IFIT1P1-201ENST00000400497 1449 ntBASIC4.85□□□□□ -1.63
CDX1P47902 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDX1P47902 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 AL161756.3-201ENST00000641216 2071 ntBASIC4.85□□□□□ -1.63
CDX1P47902 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.85□□□□□ -1.63
CDX1P47902 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.85□□□□□ -1.63
CDX1P47902 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDX1P47902 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 RNU1-49P-201ENST00000363468 159 ntBASIC4.84□□□□□ -1.63
CDX1P47902 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDX1P47902 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 AL357078.2-201ENST00000416486 427 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 RPS7P14-201ENST00000426405 583 ntBASIC4.84□□□□□ -1.63
CDX1P47902 BX119321.1-201ENST00000428912 797 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.84□□□□□ -1.63
CDX1P47902 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.84□□□□□ -1.63
CDX1P47902 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms