Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 NXT1P1-201ENST00000458481 316 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC007998.1-201ENST00000474156 672 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC087672.1-201ENST00000479876 766 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 RPS17P5-201ENST00000498293 408 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 PSMA2P2-201ENST00000504319 686 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 DUTP7-201ENST00000507982 486 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 SNORD46.2-201ENST00000516021 102 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 IGKV2-19-201ENST00000518132 283 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 HSPE1P2-201ENST00000554777 306 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 MIR4675-201ENST00000577898 77 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 FAM60CP-201ENST00000591086 664 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC027243.2-201ENST00000602530 724 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL592494.3-201ENST00000609485 464 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL390318.1-201ENST00000624564 687 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC138907.8-201ENST00000623981 2256 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL606537.1-201ENST00000607258 2011 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC104297.1-201ENST00000393779 870 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 HMGB1P20-201ENST00000402555 677 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC096921.1-201ENST00000411661 375 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 EEF1B2P8-201ENST00000414101 671 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RPL23AP19-201ENST00000436229 369 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 NANOGP9-201ENST00000439890 892 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 HMGN1P8-201ENST00000463578 288 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RNU6-615P-201ENST00000516065 106 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC022826.1-201ENST00000519383 805 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 MRPS16P1-201ENST00000523462 412 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC018552.1-201ENST00000562099 811 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 Z95327.3-201ENST00000610385 572 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC015722.2-201ENST00000622210 551 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 AC005618.4-201ENST00000625053 554 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 PWAR1-201ENST00000624188 2414 ntBASIC5.69□□□□□ -1.5
HLA-DPA1P20036 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms