Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AP001437.1-201ENST00000608783 456 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 AL352984.2-201ENST00000611153 546 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 AL139407.1-201ENST00000613826 1175 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 AC098679.4-201ENST00000624241 654 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN1P18031 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN1P18031 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN1P18031 OR7A1P-202ENST00000641542 1158 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PTPN1P18031 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTPN1P18031 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN1P18031 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN1P18031 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTPN1P18031 CR382285.2-201ENST00000624662 1495 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN1P18031 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN1P18031 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN1P18031 AL662795.2-201ENST00000624252 3706 ntBASIC6.58□□□□□ -1.36
PTPN1P18031 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN1P18031 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN1P18031 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN1P18031 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN1P18031 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 AC073365.1-203ENST00000641055 1992 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 AC011416.1-201ENST00000514947 1732 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN1P18031 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN1P18031 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 SNORD116-1-201ENST00000384335 95 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 RNU6-636P-201ENST00000384598 107 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN1P18031 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.57□□□□□ -1.36
PTPN1P18031 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 AL391422.1-201ENST00000402155 436 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AL021331.1-201ENST00000402817 582 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 ATF1P1-201ENST00000406040 927 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 RN7SKP278-201ENST00000410504 342 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC016907.1-201ENST00000419483 435 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC130360.1-201ENST00000425489 1117 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC069154.1-201ENST00000432914 542 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 USP9YP28-201ENST00000435142 589 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC023141.3-201ENST00000436698 278 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 VN1R110P-201ENST00000438988 971 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AMYP1-201ENST00000440059 1023 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC097463.1-201ENST00000447288 481 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 Z83838.1-202ENST00000456225 839 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 SNORA3.4-201ENST00000515969 96 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC130365.2-201ENST00000525882 1201 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC079064.1-201ENST00000528365 362 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 DUXAP6-201ENST00000553858 601 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC093524.1-201ENST00000564266 1094 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC109446.2-201ENST00000567872 497 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC011497.2-201ENST00000600255 639 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AC024060.1-201ENST00000607052 494 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 FAM27E2-201ENST00000619668 403 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 OR8G3P-202ENST00000641572 1255 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 AP000547.3-204ENST00000588548 2523 ntBASIC6.57□□□□□ -1.36
PTPN1P18031 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN1P18031 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN1P18031 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN1P18031 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN1P18031 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN1P18031 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
PTPN1P18031 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
PTPN1P18031 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 SNORA51.9-201ENST00000384295 124 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms