Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL159987.1-201ENST00000347911 293 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RN7SKP162-201ENST00000363605 345 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL357752.1-201ENST00000412817 349 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 OR6E1P-201ENST00000414424 923 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL356806.1-201ENST00000422524 916 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL445528.1-201ENST00000426330 420 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC073410.1-201ENST00000435125 589 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ARL5AP3-201ENST00000439327 386 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 SNRPFP2-201ENST00000440710 251 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL163193.1-201ENST00000444895 788 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RN7SL72P-201ENST00000460697 269 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 SIAH1P1-201ENST00000479411 923 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC087672.1-201ENST00000479876 766 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RPL38P3-201ENST00000484463 213 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC008638.1-201ENST00000506035 866 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC136777.2-201ENST00000522979 358 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 OR4V1P-201ENST00000525394 1140 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL049779.3-201ENST00000557141 606 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC012414.2-201ENST00000559474 187 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC007346.2-201ENST00000564816 892 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC063977.5-201ENST00000601044 974 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC015922.4-201ENST00000612568 690 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC003985.2-201ENST00000562268 1669 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC117409.1-201ENST00000470499 1310 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AC022417.1-201ENST00000624768 1303 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 AL137141.1-201ENST00000624622 4836 ntBASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.42□□□□□ -1.54
RAB40ALP0C0E4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC140134.1-201ENST00000511830 3544 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 OR13C3-201ENST00000374781 1108 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 SNORA11B-201ENST00000408175 129 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 RMRPP5-201ENST00000411156 267 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 GABARAPL3-201ENST00000412799 354 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 NPM1P4-201ENST00000414095 812 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC017019.1-201ENST00000426129 261 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 BRWD1P3-201ENST00000428816 390 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 MTCO1P45-201ENST00000431457 267 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 FMO7P-201ENST00000436045 768 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC015983.1-201ENST00000441577 373 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 LDHBP2-201ENST00000456969 1005 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 MTND6P32-201ENST00000457611 483 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC089999.1-201ENST00000460336 374 ntBASIC5.41□□□□□ -1.54
RAB40ALP0C0E4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms