Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 AC090018.1-201ENST00000434369 367 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 RPL35AP21-201ENST00000437667 333 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC097463.1-201ENST00000447288 481 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AL596266.1-201ENST00000448132 400 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CXCL1P09341 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 EIF2S2P5-201ENST00000457635 968 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC090589.1-201ENST00000473109 362 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 CBX1P5-201ENST00000475330 559 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC073358.1-201ENST00000505671 684 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 SETP21-201ENST00000514799 892 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 SCARNA18.1-201ENST00000516330 83 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.15□□□□□ -1.75
CXCL1P09341 AC024940.3-201ENST00000538551 316 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CXCL1P09341 AC011270.1-201ENST00000558606 583 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC096996.1-201ENST00000563813 325 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC007346.1-201ENST00000569208 867 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 RN7SL176P-201ENST00000580352 264 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 RNF138P2-201ENST00000603490 592 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 RNU6-84P-201ENST00000607737 102 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 SNORD91B-202ENST00000608459 222 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AL451049.1-201ENST00000608672 497 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC092681.3-201ENST00000609463 678 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.15□□□□□ -1.75
CXCL1P09341 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CXCL1P09341 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CXCL1P09341 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
CXCL1P09341 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.15□□□□□ -1.75
CXCL1P09341 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CXCL1P09341 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 MIPEPP2-201ENST00000422560 1819 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 AL022324.2-201ENST00000434827 780 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC023141.3-201ENST00000436698 278 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 RPEP4-201ENST00000437636 602 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 RPS19P6-201ENST00000441327 433 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC005077.1-201ENST00000449226 375 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL1P09341 CFL1P4-201ENST00000451536 498 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AL445433.1-201ENST00000457507 257 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 RPS7P10-201ENST00000464254 603 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL1P09341 RPL21P6-201ENST00000479171 504 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC073610.1-201ENST00000489971 396 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL1P09341 HMGN1P16-201ENST00000508308 283 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 AC105031.1-201ENST00000518550 476 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC134698.5-201ENST00000519444 336 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC009879.1-201ENST00000520029 839 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC092332.1-201ENST00000563684 829 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 OR1E3-201ENST00000575608 948 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 RN7SL657P-201ENST00000582431 293 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC090236.2-201ENST00000587933 1101 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 AC012511.1-201ENST00000608140 449 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL1P09341 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL1P09341 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL1P09341 DDX18P4-201ENST00000511690 1966 ntBASIC4.14□□□□□ -1.75
CXCL1P09341 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms