Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 GNG5P2-201ENST00000372054 207 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ZIC3O60481 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 AC069282.1-201ENST00000411911 526 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 RPS26P38-201ENST00000414476 348 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.23□□□□□ -1.57
ZIC3O60481 AC017078.1-201ENST00000416146 368 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 AC093155.2-201ENST00000420734 937 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 GLUD1P9-201ENST00000420997 1173 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.23□□□□□ -1.57
ZIC3O60481 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 BX119321.1-201ENST00000428912 797 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.23□□□□□ -1.57
ZIC3O60481 USP24P1-201ENST00000433802 779 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 AC046176.1-201ENST00000435260 1170 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 SUMO2P3-201ENST00000438311 288 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 AL627224.1-201ENST00000448334 444 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AL451063.1-201ENST00000450164 1133 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC016724.1-201ENST00000453215 421 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 RPS26P24-201ENST00000497656 331 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 TPT1P8-201ENST00000510120 555 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 RNU6-334P-201ENST00000517072 102 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.23□□□□□ -1.57
ZIC3O60481 UBTFL9-201ENST00000534504 1148 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 AC023158.1-201ENST00000561632 1025 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 DPPA2P4-201ENST00000563717 878 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.23□□□□□ -1.57
ZIC3O60481 MTCO3P22-201ENST00000603219 784 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC015849.2-201ENST00000605738 409 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 AC103703.1-201ENST00000634783 663 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 UGT2B24P-201ENST00000514441 1597 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 IMMTP1-201ENST00000435590 2219 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 AC007842.1-201ENST00000597336 2039 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ZIC3O60481 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ZIC3O60481 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.22□□□□□ -1.57
ZIC3O60481 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.22□□□□□ -1.57
ZIC3O60481 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZIC3O60481 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 RNA5SP122-201ENST00000384457 108 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 SNORD65-201ENST00000391079 73 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AL121977.1-201ENST00000401636 979 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 HMGB1P20-201ENST00000402555 677 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 OR2W4P-201ENST00000406496 926 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 CBX1P3-201ENST00000413296 527 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.22□□□□□ -1.57
ZIC3O60481 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.22□□□□□ -1.57
ZIC3O60481 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.22□□□□□ -1.57
ZIC3O60481 AL022331.1-201ENST00000429025 477 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.22□□□□□ -1.57
ZIC3O60481 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 AL645638.1-201ENST00000440519 361 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AC064862.4-201ENST00000442180 334 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 HMGN1P36-201ENST00000446623 298 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms