Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 COX4I1P1-201ENST00000554239 509 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.14□□□□□ -1.11
HOXA2O43364 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC007151.1-201ENST00000572774 483 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXA2O43364 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC016629.2-201ENST00000597341 199 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 RPL12P25-202ENST00000598100 674 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 COX6CP16-201ENST00000603667 216 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AC106900.2-201ENST00000604994 317 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXA2O43364 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC007347.2-201ENST00000623044 180 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AC110994.2-201ENST00000635481 492 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 MKKS-204ENST00000639674 192 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 AL136146.1-201ENST00000529830 1667 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXA2O43364 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
HOXA2O43364 AC091305.2-201ENST00000624049 1576 ntBASIC8.14□□□□□ -1.11
HOXA2O43364 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 AC020904.2-202ENST00000614660 1401 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXA2O43364 LINC02035-201ENST00000610128 5476 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 MFSD8-227ENST00000641393 4069 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXA2O43364 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXA2O43364 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXA2O43364 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXA2O43364 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 Y_RNA.58-201ENST00000362807 102 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 Y_RNA.154-201ENST00000363624 102 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 RNY3P1-201ENST00000365085 102 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 RNY3-201ENST00000365484 102 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 Y_RNA.490-201ENST00000384413 102 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 MIR138-2-201ENST00000384916 84 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXA2O43364 SNORA11D-201ENST00000408548 128 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 SNORA11E-201ENST00000408778 128 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 AL450992.3-201ENST00000413192 568 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC127537.1-201ENST00000418183 748 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 PPIAP23-201ENST00000420099 497 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 CYP4F34P-201ENST00000425951 481 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC127526.2-201ENST00000426436 775 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 OR52B5P-201ENST00000435337 951 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC093716.1-201ENST00000435923 377 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 RPSAP40-201ENST00000442343 891 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 ARPC3P5-201ENST00000448802 534 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 OR7E7P-201ENST00000455678 1012 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC091564.1-201ENST00000464563 479 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
HOXA2O43364 TUBBP11-201ENST00000472255 252 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC079080.1-201ENST00000479841 822 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC104687.1-201ENST00000485829 412 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 SUMO2P17-201ENST00000504438 285 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.13□□□□□ -1.11
HOXA2O43364 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC107954.1-201ENST00000565906 727 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC034268.2-201ENST00000571784 482 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
HOXA2O43364 MIR3682-201ENST00000581338 84 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC005262.1-201ENST00000588562 362 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXA2O43364 AC012507.3-201ENST00000603556 477 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 uc_338.37-201ENST00000620113 186 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 AL158801.5-201ENST00000623123 465 ntBASIC8.13□□□□□ -1.11
HOXA2O43364 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXA2O43364 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms