Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL450996.1-201ENST00000445574 1202 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.58□□□□□ -1.68
SDCBPO00560 LRRC37A14P-201ENST00000452297 462 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SDCBPO00560 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 AC012123.2-201ENST00000485809 248 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 EIF3LP3-201ENST00000495197 822 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 PFN1P8-201ENST00000497012 543 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 AC016559.2-201ENST00000510759 359 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 RN7SKP70-201ENST00000516655 271 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.58□□□□□ -1.68
SDCBPO00560 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.58□□□□□ -1.68
SDCBPO00560 DPPA2P4-201ENST00000563717 878 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 AC127024.5-201ENST00000580085 462 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 FAM72A-208ENST00000607379 1139 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 AC008079.2-201ENST00000623543 20396 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
SDCBPO00560 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.58□□□□□ -1.68
SDCBPO00560 AC004817.4-201ENST00000602396 3625 ntBASIC4.58□□□□□ -1.68
SDCBPO00560 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.57□□□□□ -1.68
SDCBPO00560 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 AC114786.1-201ENST00000512892 1415 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 MIR551A-201ENST00000385042 96 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SDCBPO00560 RPL12P9-201ENST00000412942 488 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 EEF1B2P8-201ENST00000414101 671 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 DPPA2P2-201ENST00000418220 897 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC017019.1-201ENST00000426129 261 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SDCBPO00560 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC016772.1-201ENST00000444170 1261 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC005297.1-201ENST00000444765 862 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 HMGN1P2-201ENST00000445197 310 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 PRPF38AP1-201ENST00000451976 933 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SDCBPO00560 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC094085.1-201ENST00000468914 584 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.57□□□□□ -1.68
SDCBPO00560 CYCSP22-201ENST00000517555 339 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.57□□□□□ -1.68
SDCBPO00560 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC005363.1-201ENST00000530779 351 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.57□□□□□ -1.68
SDCBPO00560 OR11H3P-201ENST00000554547 982 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.57□□□□□ -1.68
SDCBPO00560 MTCYBP13-201ENST00000578634 1093 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC108865.2-201ENST00000606881 432 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC018690.1-201ENST00000608144 626 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC025574.2-201ENST00000615621 514 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AP005431.1-201ENST00000618479 319 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 AC135068.5-201ENST00000624197 983 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.57□□□□□ -1.68
SDCBPO00560 MIR193BHG-214ENST00000641765 509 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SDCBPO00560 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SDCBPO00560 SMG1P4-204ENST00000523028 4131 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AC015689.2-201ENST00000528172 1738 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 AL353796.1-201ENST00000561542 3241 ntBASIC4.57□□□□□ -1.68
SDCBPO00560 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.57□□□□□ -1.68
SDCBPO00560 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.57□□□□□ -1.68
SDCBPO00560 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 AC011755.1-201ENST00000623763 2049 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 AC104623.2-202ENST00000623477 4002 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 RNA5SP131-201ENST00000365452 119 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SDCBPO00560 RPL21P67-201ENST00000402896 478 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 RPS3P2-201ENST00000421346 701 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms