Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GARSP1-201ENST00000570895 719 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 RFPL4AP6-201ENST00000616792 846 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AL357562.1-201ENST00000624911 609 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC073488.3-201ENST00000631611 778 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 AL031595.2-201ENST00000624215 19071 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDLIM1O00151 MTCO1P15-201ENST00000529569 1526 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM1O00151 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
PDLIM1O00151 RN7SKP275-201ENST00000364626 301 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 MIR621-201ENST00000384919 96 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 U3.28-201ENST00000391249 210 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 RPL12P12-201ENST00000424633 501 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AKR1B10P1-201ENST00000425765 942 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AMYP1-201ENST00000440059 1023 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 FTLP8-201ENST00000446770 267 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 RNU1-88P-201ENST00000459274 128 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC068228.1-201ENST00000461723 211 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 MYL12BP2-201ENST00000503948 512 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 OR4A42P-201ENST00000531397 938 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 CYCSP38-201ENST00000559840 322 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC073333.2-201ENST00000603589 769 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC087283.1-201ENST00000604029 1074 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC087468.1-201ENST00000604365 630 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AL645933.2-201ENST00000606743 1207 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC092681.3-201ENST00000609463 678 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC073575.2-201ENST00000614212 627 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM1O00151 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM1O00151 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 AC008627.1-201ENST00000517511 1704 ntBASIC5.37□□□□□ -1.55
PDLIM1O00151 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM1O00151 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM1O00151 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM1O00151 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PDLIM1O00151 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM1O00151 RNA5SP433-201ENST00000364491 114 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM1O00151 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM1O00151 AC005522.1-201ENST00000395416 346 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AL132875.1-201ENST00000403623 949 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC096921.1-201ENST00000411661 375 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM1O00151 COX5BP7-201ENST00000414780 274 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 VN1R21P-201ENST00000426703 765 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM1O00151 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM1O00151 RPS17P5-201ENST00000498293 408 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC008629.2-201ENST00000503783 483 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC105384.2-201ENST00000508433 640 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM1O00151 MIR7853-201ENST00000584820 132 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms