Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AL121886.1-201ENST00000358609 435 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 MIR133B-201ENST00000362210 119 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RNA5SP183-201ENST00000362452 119 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 SNORA74A-201ENST00000364089 198 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RNU1-136P-201ENST00000384181 164 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 SNORA16A-201ENST00000384342 137 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RNF10P1-201ENST00000418589 369 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AL691447.1-201ENST00000419456 387 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC007161.1-204ENST00000423039 460 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AL139148.1-201ENST00000427122 680 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 CNOT7P2-201ENST00000441051 832 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AURKAPS1-201ENST00000451805 1212 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RN7SL727P-201ENST00000482164 296 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC008953.1-201ENST00000497334 318 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 MTCO3P42-201ENST00000509488 518 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 MTCO3P39-201ENST00000514812 518 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RN7SKP253-201ENST00000516424 309 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 HAUS8P1-201ENST00000549005 542 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC044860.2-201ENST00000561005 179 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 RBM22P1-201ENST00000578589 1214 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 MIR4433B-201ENST00000581329 102 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 AC092944.2-201ENST00000605443 889 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 SAMMSON-227ENST00000642114 1199 ntBASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NEDD8-MDP1E9PL57 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 AP002512.4-202ENST00000641599 4530 ntBASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD8-MDP1E9PL57 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AL138820.1-201ENST00000617901 5305 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC005294.1-201ENST00000355509 281 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 RNU6-167P-201ENST00000384292 106 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 RPSAP35-201ENST00000413753 818 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 FAM96AP1-201ENST00000430879 482 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 FAR2P1-206ENST00000449736 709 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC005532.2-201ENST00000467154 373 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC079841.1-201ENST00000481228 950 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 ATP5LP5-201ENST00000483050 299 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC004815.1-201ENST00000484185 331 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC012123.2-201ENST00000485809 248 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 RPS21P4-201ENST00000487122 248 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC072052.1-201ENST00000496556 306 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 SCARNA16.4-201ENST00000516956 187 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 NPM1P42-201ENST00000560329 862 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC093388.1-201ENST00000609166 430 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC138627.1-204ENST00000641894 765 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 CR383656.5-201ENST00000547616 1340 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 BCORP1-203ENST00000513194 5093 ntBASIC5.64□□□□□ -1.51
NEDD8-MDP1E9PL57 AC092070.2-203ENST00000598377 3644 ntBASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NEDD8-MDP1E9PL57 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms