Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 OR4A40P-201ENST00000533878 948 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 C1GALT1P1-201ENST00000548895 1089 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC079298.1-201ENST00000625026 1619 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-1320P-201ENST00000390838 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-1269P-201ENST00000391139 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 TMA16P2-201ENST00000413187 601 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 UBE2D3P3-201ENST00000426992 425 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 PTMAP6-201ENST00000439110 327 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC009237.1-201ENST00000442127 744 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 MORF4-201ENST00000447135 971 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RPL23AP23-201ENST00000452590 471 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-599P-201ENST00000459383 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-1193P-201ENST00000459461 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC020779.1-201ENST00000478757 796 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 SIAH1P1-201ENST00000479411 923 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC079080.1-201ENST00000479841 822 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC114728.1-201ENST00000488289 483 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 MTCO2P9-201ENST00000503214 694 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC108120.2-201ENST00000512973 294 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 SNORA70.20-201ENST00000516848 126 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 IGKV1D-22-201ENST00000518953 324 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC109635.6-201ENST00000525487 1113 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 OR4A17P-201ENST00000526032 904 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AL645933.2-201ENST00000606743 1207 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-368P-201ENST00000620928 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 RNU6-538P-201ENST00000622329 107 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC015660.5-201ENST00000623238 564 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC011455.2-201ENST00000599320 3336 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 AC083837.1-201ENST00000565297 2994 ntBASIC8.19□□□□□ -1.1
USP35Q9P2H5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
USP35Q9P2H5 MT-RNR2-201ENST00000387347 1559 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC074141.1-201ENST00000588129 2995 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 RNU6-171P-201ENST00000384354 107 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 GAPDHP15-201ENST00000398586 975 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 RN7SKP216-201ENST00000411050 312 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 NPM1P4-201ENST00000414095 812 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 PTP4A1P3-201ENST00000433661 420 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 MTCYBP12-201ENST00000440559 1134 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL158053.1-201ENST00000441503 453 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL445466.1-201ENST00000448432 357 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC092865.4-201ENST00000477936 615 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 CR383656.1-201ENST00000484916 377 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC023158.1-201ENST00000561632 1025 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms