Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC135999.1-201ENST00000478962 479 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 GOLGA5P1-201ENST00000507317 980 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC106872.4-201ENST00000510050 523 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC090286.3-201ENST00000573133 187 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 AL355480.1-201ENST00000629041 99 ntBASIC6.15□□□□□ -1.42
CCSER1Q9C0I3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 AL442128.2-201ENST00000620246 1824 ntBASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCSER1Q9C0I3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 MIR143-201ENST00000385300 106 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AL391422.1-201ENST00000402155 436 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 TNPO1P1-201ENST00000423641 1138 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 PPIAP20-201ENST00000449839 135 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC012123.2-201ENST00000485809 248 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 RPSAP51-201ENST00000497462 645 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC105420.1-201ENST00000504389 582 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC112191.2-201ENST00000522428 333 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 MIR1273E-201ENST00000581165 102 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 RN7SL753P-201ENST00000581238 290 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AP000769.2-201ENST00000602344 396 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 AC132068.1-201ENST00000623805 459 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 Z83820.1-201ENST00000456978 1499 ntBASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCSER1Q9C0I3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 MIR323A-201ENST00000362199 86 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 DBIP1-201ENST00000401435 260 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 NPM1P37-201ENST00000403105 874 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 GABARAPL3-201ENST00000412799 354 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 RPL12P17-201ENST00000432393 498 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AC109464.1-201ENST00000511091 819 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 OR8G3P-201ENST00000533406 921 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AC022404.1-201ENST00000555320 273 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 AP005435.3-201ENST00000531260 3198 ntBASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.13□□□□□ -1.43
CCSER1Q9C0I3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 RNA5SP242-201ENST00000364171 118 ntBASIC6.12□□□□□ -1.43
CCSER1Q9C0I3 SNORA16A-201ENST00000384342 137 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms