Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 CARSP2-201ENST00000520688 277 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AP003461.1-201ENST00000528866 78 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 GLYATL1P4-201ENST00000529326 906 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 NIFKP8-201ENST00000560500 874 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL022161.1-201ENST00000604390 213 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC245008.1-201ENST00000608123 476 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MIR6885-201ENST00000612241 66 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL354718.1-201ENST00000619764 589 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC005753.1-201ENST00000623837 618 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 TTC39DP-201ENST00000416781 1688 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MSL3P1-202ENST00000440028 1468 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 VPS35P1-201ENST00000563400 1518 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC120338.1-201ENST00000625074 1541 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 OR5M2P-202ENST00000641241 4242 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RNA5SP188-201ENST00000362916 129 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RNU6-77P-201ENST00000410554 91 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RNU2-22P-201ENST00000411266 212 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RN7SKP108-201ENST00000411367 328 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 Z82198.3-201ENST00000421145 199 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 TNPO1P1-201ENST00000423641 1138 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 NANOGP4-201ENST00000427230 913 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AP001324.1-201ENST00000428553 399 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 KCTD9P1-201ENST00000430462 1167 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 PUDPP2-201ENST00000431423 643 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 MRPS21P3-201ENST00000436696 262 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC009237.4-201ENST00000441078 238 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RPL12P49-201ENST00000441100 121 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 PCNPP2-201ENST00000441651 455 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 MRPL42P4-201ENST00000453267 443 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RN7SL372P-201ENST00000461982 298 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC011979.1-201ENST00000472300 483 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC044810.1-201ENST00000480271 711 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC073522.1-201ENST00000483312 377 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RN7SL306P-201ENST00000492941 296 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 C1GALT1P3-201ENST00000522049 819 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 NBEAP1-201ENST00000554452 979 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 VIS1.1-201ENST00000610517 203 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC105227.2-201ENST00000615075 605 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 TCL6_3.1-201ENST00000619064 137 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AL157770.1-201ENST00000623049 439 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC139792.2-201ENST00000624218 587 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AP003497.2-201ENST00000624220 967 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms