Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HMGB1P46-201ENST00000520062 610 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 EIF4A2P5-201ENST00000529914 499 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AP001804.2-201ENST00000533932 910 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC027667.1-201ENST00000545814 304 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC004890.3-201ENST00000605566 1095 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 RNU6-84P-201ENST00000607737 102 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC007938.2-201ENST00000604666 2634 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 ZNF658B-201ENST00000602828 3408 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 AC087516.1-201ENST00000561236 2428 ntBASIC7.05□□□□□ -1.28
RTFDC1Q9BY42 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC003985.2-201ENST00000562268 1669 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 RNA5SP319-201ENST00000362768 119 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC005042.1-201ENST00000393397 800 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL627224.1-201ENST00000448334 444 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL162739.1-201ENST00000450606 307 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC078857.1-201ENST00000469870 667 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC004453.1-201ENST00000487895 408 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 NPM1P28-201ENST00000492269 840 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC090638.1-201ENST00000498296 909 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC103833.1-201ENST00000517442 172 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 VTA1P2-201ENST00000520205 911 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC126615.2-201ENST00000553003 515 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC004825.1-201ENST00000555068 586 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC116651.1-201ENST00000609724 556 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC025016.1-201ENST00000616746 682 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL355974.3-201ENST00000617383 467 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AL645927.2-201ENST00000618350 349 ntBASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.04□□□□□ -1.28
RTFDC1Q9BY42 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AL136520.1-201ENST00000600311 1322 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 RAD1P1-201ENST00000231383 813 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AL133270.1-201ENST00000402635 279 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC116036.1-201ENST00000412199 367 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 RANP4-201ENST00000413361 655 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 BTF3P9-201ENST00000418784 283 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 XKRY2-201ENST00000442362 1093 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 RPL7L1P3-201ENST00000455249 689 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AL355032.1-201ENST00000472981 438 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC015908.1-201ENST00000478739 476 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 RPL7P39-201ENST00000481157 744 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC074255.1-201ENST00000511259 501 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC113192.3-201ENST00000529152 742 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 MIR4301-201ENST00000577203 66 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 MIR132-201ENST00000591554 101 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 MTATP6P2-201ENST00000603319 678 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AL445222.1-201ENST00000607259 628 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC068870.2-201ENST00000620635 389 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC132068.1-201ENST00000623805 459 ntBASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.03□□□□□ -1.28
RTFDC1Q9BY42 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms