Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL353662.1-201ENST00000439099 327 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 ATP5LP2-201ENST00000440646 311 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 EIF5AP4-201ENST00000441206 465 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 HMGN1P2-201ENST00000445197 310 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 CASP3P1-201ENST00000446037 609 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 AC243772.1-201ENST00000451620 410 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RPL10P17-201ENST00000453852 316 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC023194.2-201ENST00000465398 406 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RN7SL221P-201ENST00000466190 281 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC079080.1-201ENST00000479841 822 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 RN7SL591P-201ENST00000496150 292 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 PRMT5P1-201ENST00000514351 598 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 OR8X1P-201ENST00000534542 869 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC092865.1-201ENST00000544395 1023 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.99□□□□□ -1.61
SSX3Q99909 AC008507.3-201ENST00000585753 472 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AL137072.1-201ENST00000603444 466 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX3Q99909 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 AC004801.6-201ENST00000616571 978 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AL512652.1-201ENST00000619006 500 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 SNORA11.6-201ENST00000619030 128 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 AL359742.1-201ENST00000622497 540 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.99□□□□□ -1.61
SSX3Q99909 MIR1910-201ENST00000636955 80 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX3Q99909 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 AOX3P-204ENST00000491025 2107 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SSX3Q99909 SMG1P4-204ENST00000523028 4131 ntBASIC4.99□□□□□ -1.61
SSX3Q99909 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX3Q99909 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SSX3Q99909 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 SNORA21-201ENST00000362423 132 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 RNA5SP110-201ENST00000362638 115 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.98□□□□□ -1.61
SSX3Q99909 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 RNU1-74P-201ENST00000384108 171 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AL132875.1-201ENST00000403623 949 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AL136116.2-201ENST00000404020 785 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC015977.1-201ENST00000418887 292 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC006065.1-201ENST00000422539 802 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 KIF4CP-201ENST00000422742 1279 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 MTCO1P45-201ENST00000431457 267 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 PPIAP27-201ENST00000453800 265 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 NDUFA5P5-201ENST00000468361 342 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 STRADBP1-201ENST00000478954 1281 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 LSM3P4-201ENST00000502948 309 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 BTG4P1-201ENST00000510421 183 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.98□□□□□ -1.61
SSX3Q99909 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC026616.1-201ENST00000523157 525 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC027369.2-201ENST00000528030 440 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.98□□□□□ -1.61
SSX3Q99909 OR4A43P-201ENST00000532938 908 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.98□□□□□ -1.61
SSX3Q99909 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX3Q99909 CYCSP38-201ENST00000559840 322 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms