Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.74□□□□□ -1.49
RPRD1AQ96P16 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.74□□□□□ -1.49
RPRD1AQ96P16 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL121839.2-201ENST00000565058 6943 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 OR4F13P-202ENST00000560066 2054 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 CASC19-248ENST00000641674 1356 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RNA5SP319-201ENST00000362768 119 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RN7SKP6-201ENST00000364795 319 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL391422.1-201ENST00000402155 436 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 GNG5P5-201ENST00000420444 220 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 BX119904.3-201ENST00000428194 957 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 OR2AF1P-201ENST00000454899 889 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RN7SL51P-201ENST00000468230 285 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC105420.1-201ENST00000504389 582 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RPL7L1P4-201ENST00000513004 707 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 GAPDHP62-201ENST00000515313 990 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC097486.1-201ENST00000515331 210 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RN7SKP253-201ENST00000516424 309 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC084824.2-201ENST00000548906 345 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 MIR6768-201ENST00000610734 72 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL118522.2-201ENST00000616045 615 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC133552.1-201ENST00000569988 4007 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPRD1AQ96P16 AC004656.1-201ENST00000568479 4951 ntBASIC5.73□□□□□ -1.49
RPRD1AQ96P16 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 NAMPTP1-201ENST00000440465 2514 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 LINC01963-201ENST00000562038 3148 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 U3.10-201ENST00000364459 214 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 MIR323B-201ENST00000385269 82 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 OR3A2-201ENST00000408891 1076 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 Z93019.1-201ENST00000416450 973 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC079355.1-201ENST00000421770 223 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RPL35AP19-201ENST00000469425 329 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC100832.1-201ENST00000471945 383 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RN7SL583P-201ENST00000475692 287 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 KATNBL1P4-201ENST00000503545 918 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC006363.1-201ENST00000603806 463 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC004158.1-201ENST00000564508 4319 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 AC015799.1-201ENST00000622996 3122 ntBASIC5.72□□□□□ -1.49
RPRD1AQ96P16 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms