Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AL009179.1-201ENST00000406085 265 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AL139039.2-201ENST00000407436 479 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 RPS27AP6-201ENST00000427962 448 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 HMGB3P24-201ENST00000433260 622 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC097523.2-201ENST00000435551 652 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AZGP1P2-201ENST00000454506 345 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC114781.3-201ENST00000512083 142 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 SNORA70.17-201ENST00000516449 133 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 SNORA70.20-201ENST00000516848 126 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 MRPS16P1-201ENST00000523462 412 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 HMGB1P42-201ENST00000532126 553 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM5Q96HC4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC004158.1-201ENST00000564508 4319 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC003973.3-201ENST00000624863 2822 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 MIR375-201ENST00000362103 64 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RNA5SP131-201ENST00000365452 119 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC002524.1-201ENST00000411687 547 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RPS6P23-201ENST00000413224 722 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC245060.4-201ENST00000413293 1121 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 GLUD1P9-201ENST00000420997 1173 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC007161.1-204ENST00000423039 460 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC127526.2-201ENST00000426436 775 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RAD1P2-201ENST00000446414 663 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 BUD31P2-201ENST00000449374 300 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 STRADBP1-201ENST00000478954 1281 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC087672.1-201ENST00000479876 766 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 OR52A4P-203ENST00000498233 1014 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ATG10-AS1-201ENST00000504846 648 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 RN7SKP70-201ENST00000516655 271 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 TRAV11-201ENST00000539512 339 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC092121.1-201ENST00000569452 202 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC134669.1-201ENST00000581275 672 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 FAM106CP-201ENST00000582212 507 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC007786.3-201ENST00000615154 596 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 MIR6133-201ENST00000617057 108 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AL391597.1-201ENST00000618707 694 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AL133370.2-201ENST00000619934 439 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms