Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CR381653.2-201ENST00000624041 768 ntBASIC7.44□□□□□ -1.22
TRIM11Q96F44 AL355480.4-201ENST00000626823 69 ntBASIC7.44□□□□□ -1.22
TRIM11Q96F44 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM11Q96F44 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM11Q96F44 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM11Q96F44 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 MAPK10-323ENST00000641493 3207 ntBASIC7.44□□□□□ -1.22
TRIM11Q96F44 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM11Q96F44 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM11Q96F44 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC022507.1-201ENST00000548349 1505 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC079949.2-201ENST00000617117 2933 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC010168.2-201ENST00000562691 5428 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 ZNF90P1-201ENST00000480493 1951 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 FAUP2-201ENST00000394301 401 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 NHP2P2-201ENST00000396362 460 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL079341.1-201ENST00000404701 1207 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 MIR1302-11-201ENST00000408051 138 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 MIR1302-9-201ENST00000408365 138 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 MIR1302-10-201ENST00000408734 138 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 BTF3P8-201ENST00000414577 526 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CNOT7P1-201ENST00000429006 852 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 MTCYBP42-201ENST00000444653 1130 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 NIPA2P5-201ENST00000452282 464 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 RPL23AP8-201ENST00000479812 475 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC092989.1-201ENST00000481235 277 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC023050.1-201ENST00000498198 304 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 HMGB1P3-201ENST00000502802 616 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC084024.2-201ENST00000503480 791 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 TCP11X3P-202ENST00000514289 1254 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AP003084.1-201ENST00000524828 742 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AP003033.2-201ENST00000528901 805 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 OR5BK1P-201ENST00000550421 823 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 NDUFA5P11-201ENST00000567995 343 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC008507.1-201ENST00000587506 734 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL136139.1-201ENST00000605568 222 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 MIR1302-2-201ENST00000607096 138 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL589743.7-201ENST00000612637 233 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 RMST_10.1-201ENST00000616309 154 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 AL359715.3-201ENST00000569267 2123 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM11Q96F44 ZNF402P-201ENST00000404435 3100 ntBASIC7.43□□□□□ -1.22
TRIM11Q96F44 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
TRIM11Q96F44 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM11Q96F44 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
TRIM11Q96F44 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM11Q96F44 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM11Q96F44 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM11Q96F44 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM11Q96F44 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms