Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHMP4CQ96CF2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC003985.2-201ENST00000562268 1669 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 SNORA63.3-201ENST00000362682 132 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 OR13C3-201ENST00000374781 1108 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 NPM1P37-201ENST00000403105 874 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 NACAP7-201ENST00000407371 609 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 RANP4-201ENST00000413361 655 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AL354692.1-201ENST00000423044 315 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC046176.1-201ENST00000435260 1170 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AL627224.1-201ENST00000448334 444 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ACA64.4-201ENST00000459070 127 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 RN7SL269P-201ENST00000467795 305 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC092865.4-201ENST00000477936 615 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC104109.1-201ENST00000498563 436 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 HMGB1P3-201ENST00000502802 616 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC105420.1-201ENST00000504389 582 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AP001804.2-201ENST00000533932 910 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC027216.1-201ENST00000577726 685 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 MIR4433B-201ENST00000581329 102 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC100767.2-201ENST00000604840 693 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC015849.2-201ENST00000605738 409 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC018645.2-201ENST00000609151 472 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AL645927.2-201ENST00000618350 349 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 AL158152.1-201ENST00000602652 1435 ntBASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHMP4CQ96CF2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC239868.2-201ENST00000564237 4527 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC022164.1-201ENST00000568767 2673 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 OR9K1P-202ENST00000641111 3217 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 GSTA12P-201ENST00000402398 508 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 SLC20A1P1-201ENST00000413906 956 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 PTP4A1P3-201ENST00000433661 420 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 KRT8P51-201ENST00000438938 274 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 RPL36AP39-201ENST00000445859 318 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC005077.1-201ENST00000449226 375 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 OSTCP1-201ENST00000455507 450 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 MTCO2P9-201ENST00000503214 694 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 GOLGA5P1-201ENST00000507317 980 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC104072.1-201ENST00000568817 668 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 MIR3614-201ENST00000581261 86 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms