Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC106901.1-201ENST00000425086 698 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC017019.1-201ENST00000426129 261 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC064862.5-201ENST00000440618 334 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL356121.1-201ENST00000442911 156 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 RPS7P3-201ENST00000443360 580 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 MTND2P3-201ENST00000452458 470 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 PPIAP7-201ENST00000454070 489 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC006539.1-201ENST00000481419 501 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC113367.2-201ENST00000505749 160 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 NACAP5-201ENST00000509863 636 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 TMEM97P2-201ENST00000517841 403 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC116917.1-201ENST00000520558 305 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AP001000.1-201ENST00000526843 742 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AP000620.1-201ENST00000527147 504 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL078601.3-201ENST00000573303 535 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC008507.3-201ENST00000585753 472 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC018809.2-201ENST00000602436 3823 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC084036.1-201ENST00000609190 508 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 RMST_5.1-201ENST00000618704 126 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 AC020763.5-201ENST00000623298 430 ntBASIC5.06□□□□□ -1.6
RFT1Q96AA3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFT1Q96AA3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
RFT1Q96AA3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC003973.3-201ENST00000624863 2822 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 RNU4-44P-201ENST00000363050 141 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 GAPDHP15-201ENST00000398586 975 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AL035422.1-201ENST00000414193 397 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AL139158.1-201ENST00000424719 340 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 VN1R21P-201ENST00000426703 765 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 RSL24D1P8-201ENST00000434442 492 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 RPS12P17-201ENST00000438591 377 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC093890.1-201ENST00000502554 540 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC108103.1-201ENST00000511286 446 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 RNU6-513P-201ENST00000516104 104 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 OR4A17P-201ENST00000526032 904 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 MT1CP-201ENST00000567054 174 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms