Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HSPD1P7-201ENST00000447985 1686 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 OR9K1P-202ENST00000641111 3217 ntBASIC6.57□□□□□ -1.36
SNED1Q8TER0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SNED1Q8TER0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 THAP12P4-201ENST00000528321 2266 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 COX6B1P1-201ENST00000415962 213 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 RPL12P17-201ENST00000432393 498 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC091390.1-201ENST00000433904 331 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 MEMO1P4-201ENST00000453590 386 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 RPL7P16-201ENST00000479738 738 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 RN7SL459P-201ENST00000481078 302 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 EIF3KP3-201ENST00000514461 639 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC005341.1-201ENST00000571086 708 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 H3F3BP2-201ENST00000583907 357 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 AC091905.4-201ENST00000623432 202 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 MTCO1P1-201ENST00000624263 1081 ntBASIC6.56□□□□□ -1.36
SNED1Q8TER0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNED1Q8TER0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SNED1Q8TER0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 HSPA8P14-201ENST00000552265 1805 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 RN7SKP149-201ENST00000363008 344 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 RNGTTP1-201ENST00000420965 728 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 TMEM183AP1-205ENST00000432739 290 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 BX679664.2-201ENST00000439282 283 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 ST13P12-201ENST00000508958 1094 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC021106.1-201ENST00000509020 1058 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 OR11H3P-201ENST00000554547 982 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 MIR4737-201ENST00000583979 81 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC073575.2-201ENST00000614212 627 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC015660.5-201ENST00000623238 564 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC135068.5-201ENST00000624197 983 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 AC068733.2-201ENST00000605434 1418 ntBASIC6.55□□□□□ -1.36
SNED1Q8TER0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.55□□□□□ -1.36
SNED1Q8TER0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNED1Q8TER0 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNED1Q8TER0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNED1Q8TER0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNED1Q8TER0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNED1Q8TER0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNED1Q8TER0 AC140479.2-201ENST00000421567 3130 ntBASIC6.54□□□□□ -1.36
SNED1Q8TER0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 OR2AM1P-201ENST00000422137 422 ntBASIC6.54□□□□□ -1.36
SNED1Q8TER0 AC073648.4-201ENST00000442655 781 ntBASIC6.54□□□□□ -1.36
SNED1Q8TER0 AC058823.1-201ENST00000485315 474 ntBASIC6.54□□□□□ -1.36
SNED1Q8TER0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SNED1Q8TER0 RN7SKP248-201ENST00000516278 305 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms