Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC008627.1-201ENST00000517511 1704 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC006206.1-201ENST00000544842 3387 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL357752.1-201ENST00000412817 349 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 RPL7AP49-201ENST00000429522 581 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL591438.1-201ENST00000433508 581 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL353662.1-201ENST00000439099 327 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC016772.1-201ENST00000444170 1261 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC005077.1-201ENST00000449226 375 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL358876.1-201ENST00000453364 1075 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 MTCYBP14-201ENST00000457471 715 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SL254P-201ENST00000460609 284 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC016687.1-201ENST00000482574 353 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 EIF3LP3-201ENST00000495197 822 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 ENPP7P11-201ENST00000505915 627 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC093325.1-201ENST00000508378 326 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC091912.1-201ENST00000511351 248 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 Vault.2-201ENST00000516519 98 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 CDC42P3-201ENST00000518493 633 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 WBP1LP3-201ENST00000523033 208 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC025423.2-201ENST00000537570 439 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AC005244.1-201ENST00000582566 339 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AP000919.1-201ENST00000582850 985 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 AL713998.2-201ENST00000604538 1198 ntBASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC71LQ8N9Z2 CR382285.2-201ENST00000624662 1495 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 MT-RNR2-201ENST00000387347 1559 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RNU6-729P-201ENST00000384399 107 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 PPIAP9-201ENST00000403866 498 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SKP29-201ENST00000410957 272 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 OR13Z1P-201ENST00000416141 834 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ARMC4P1-201ENST00000438905 707 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SL57P-201ENST00000493687 290 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SL591P-201ENST00000496150 292 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 HMGN1P16-201ENST00000508308 283 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RNU6-513P-201ENST00000516104 104 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC139365.2-201ENST00000517972 253 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AP003396.4-201ENST00000527574 265 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms