Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 PSMD10P3-201ENST00000437000 448 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 RPL7P61-201ENST00000451721 751 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC106806.2-201ENST00000509365 500 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AGGF1P7-201ENST00000562369 913 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 MIR3691-201ENST00000578066 90 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AP000919.1-201ENST00000582850 985 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC096947.1-201ENST00000603233 470 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC090772.4-201ENST00000623599 362 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AP003400.2-201ENST00000624036 666 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AP000866.6-201ENST00000638898 3579 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.02□□□□□ -1.29
SYNE4Q8N205 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC018809.2-201ENST00000602436 3823 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SYNE4Q8N205 AC107980.1-201ENST00000558671 3355 ntBASIC7.02□□□□□ -1.29
SYNE4Q8N205 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC131971.1-201ENST00000332881 1482 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AL731532.1-201ENST00000623972 4236 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 MIR620-201ENST00000385232 95 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 RNA5SP91-201ENST00000390902 119 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 Z80107.2-201ENST00000445127 392 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 FAR2P1-206ENST00000449736 709 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 RPS23P2-201ENST00000463671 415 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC115223.1-201ENST00000466377 870 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 TRBV5-2-201ENST00000489095 273 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 RPEP1-201ENST00000504507 658 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AP001960.1-201ENST00000506494 658 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC113398.2-201ENST00000507630 558 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 MTATP6P9-201ENST00000515039 680 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 SNORD116-30-201ENST00000516468 85 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 AL049840.6-202ENST00000603373 279 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AC104307.1-201ENST00000616142 196 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 AL731566.2-201ENST00000618971 317 ntBASIC7.01□□□□□ -1.29
SYNE4Q8N205 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNE4Q8N205 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SYNE4Q8N205 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 AC007938.2-201ENST00000604666 2634 ntBASIC7□□□□□ -1.29
SYNE4Q8N205 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
SYNE4Q8N205 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
SYNE4Q8N205 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7□□□□□ -1.29
SYNE4Q8N205 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 RNA5SP335-201ENST00000363817 110 ntBASIC7□□□□□ -1.29
SYNE4Q8N205 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7□□□□□ -1.29
SYNE4Q8N205 AC007618.1-201ENST00000366455 732 ntBASIC7□□□□□ -1.29
SYNE4Q8N205 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE4Q8N205 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7□□□□□ -1.29
SYNE4Q8N205 AL645733.1-201ENST00000402250 217 ntBASIC7□□□□□ -1.29
SYNE4Q8N205 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7□□□□□ -1.29
SYNE4Q8N205 RPS3AP38-201ENST00000435889 763 ntBASIC7□□□□□ -1.29
SYNE4Q8N205 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms