Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 SNORD56.6-201ENST00000384569 71 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AL596448.1-201ENST00000415024 392 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AL354766.1-201ENST00000423396 542 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC064862.4-201ENST00000442180 334 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC092106.1-201ENST00000444291 373 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 RPL36AP39-201ENST00000445859 318 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 SEPT7P3-201ENST00000455017 621 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC021106.1-201ENST00000509020 1058 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC112191.2-201ENST00000522428 333 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC079064.1-201ENST00000528365 362 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AL353796.1-201ENST00000561542 3241 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 MIR6861-201ENST00000618657 64 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 CU639417.4-201ENST00000623928 207 ntBASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC65Q8IXS2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 HSPA8P14-201ENST00000552265 1805 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AL603750.1-201ENST00000624216 1717 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RNF19BPY-201ENST00000458209 1550 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RN7SKP145-201ENST00000363291 303 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RNU4-2-201ENST00000365668 141 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 SNORA70.6-201ENST00000383934 134 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 OR6E1P-201ENST00000414424 923 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 NPM1P18-201ENST00000434232 732 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RPL31P15-201ENST00000449770 338 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC091912.1-201ENST00000511351 248 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC135626.1-201ENST00000556983 435 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC009852.2-201ENST00000567898 485 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 MIR4505-201ENST00000582238 73 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC012616.1-201ENST00000600294 197 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC009237.13-201ENST00000603193 276 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 uc_338.7-201ENST00000621834 124 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 AC133552.1-201ENST00000569988 4007 ntBASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC65Q8IXS2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 RN7SKP28-201ENST00000364770 305 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms