Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC012616.1-201ENST00000600294 197 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC108738.1-201ENST00000603703 237 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CXADRP3-202ENST00000617265 1100 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AL136231.1-201ENST00000429407 730 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 HMGN1P2-201ENST00000445197 310 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 CDY11P-201ENST00000447168 1651 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 SEPT7P3-201ENST00000455017 621 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LDHBP2-201ENST00000456969 1005 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 Z83820.1-201ENST00000456978 1499 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC135999.1-201ENST00000478962 479 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 MTND6P2-201ENST00000512226 524 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 HMGN1P9-201ENST00000515212 298 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 CDC42P3-201ENST00000518493 633 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 NRBF2P4-201ENST00000520874 850 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 IGKV2-4-201ENST00000523070 340 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AL049872.1-201ENST00000556323 322 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AP000769.2-201ENST00000602344 396 ntBASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL3Q8IVW4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 XKRY2-202ENST00000623874 1581 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 XKRY-202ENST00000624960 1581 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RNA5SP241-201ENST00000391326 114 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RPS3P2-201ENST00000421346 701 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RPL7AP49-201ENST00000429522 581 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RPL12P17-201ENST00000432393 498 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AL591438.1-201ENST00000433508 581 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AL138899.2-201ENST00000439139 499 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RN7SL72P-201ENST00000460697 269 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 IGBP1P4-201ENST00000503202 879 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 OR11H3P-201ENST00000554547 982 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 RN7SL290P-201ENST00000578661 300 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms