Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC007842.1-201ENST00000597336 2039 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AL078621.3-201ENST00000623707 2042 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RNU1-150P-201ENST00000362491 162 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 SNORD56.6-201ENST00000384569 71 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AL009179.1-201ENST00000406085 265 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 NENFP1-201ENST00000419476 466 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 OR6C64P-201ENST00000419708 825 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AL022331.1-201ENST00000429025 477 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 TPT1P1-201ENST00000458495 518 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC114982.2-201ENST00000461396 358 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RPS17P15-201ENST00000475609 349 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RPS26P24-201ENST00000497656 331 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RNA5SP473-201ENST00000516402 125 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 SNORA70.20-201ENST00000516848 126 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AL390726.5-202ENST00000564800 256 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 MIR6071-201ENST00000616741 78 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AC025262.3-201ENST00000623666 360 ntBASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC019072.1-201ENST00000604535 1551 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 SNORA64.1-201ENST00000362600 132 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC006335.2-201ENST00000437993 330 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AL136455.1-201ENST00000441083 1240 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC087672.1-201ENST00000479876 766 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 RN7SL170P-201ENST00000487098 295 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 TRIM51DP-201ENST00000529746 596 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 H3F3BP2-201ENST00000583907 357 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 MIR7853-201ENST00000584820 132 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC015802.2-201ENST00000589690 189 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC063977.5-201ENST00000601044 974 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AL589935.2-201ENST00000616471 1231 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC073593.1-201ENST00000624500 411 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC087565.3-203ENST00000641018 837 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 MRE11P1-201ENST00000464884 2127 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC083843.2-201ENST00000568248 6253 ntBASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC50Q8IVM0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 AL359715.3-201ENST00000569267 2123 ntBASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC50Q8IVM0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms