Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 MIR621-201ENST00000384919 96 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 VN1R12P-201ENST00000403778 876 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 OR13Z1P-201ENST00000416141 834 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 OR10T1P-201ENST00000424327 947 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 CDY8P-201ENST00000428380 1279 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 CDY20P-201ENST00000447528 1279 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC068587.2-201ENST00000478386 781 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 RN7SKP253-201ENST00000516424 309 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC005363.1-201ENST00000530779 351 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC084824.2-201ENST00000548906 345 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 MIR4271-201ENST00000582451 67 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 COX6CP7-201ENST00000597056 208 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AL499605.1-201ENST00000604628 403 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC034236.3-201ENST00000605999 461 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 AC025262.3-201ENST00000623666 360 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 OR8G3P-202ENST00000641572 1255 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 CASC19-260ENST00000641828 2001 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 PWAR1-201ENST00000624188 2414 ntBASIC5.62□□□□□ -1.51
ZNF549Q6P9A3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AL121886.1-201ENST00000358609 435 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 RN7SKP185-201ENST00000362813 326 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 RNA5SP30-201ENST00000365552 115 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 OR7E101P-201ENST00000400428 513 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AK4P4-201ENST00000419465 646 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 RPL5P2-201ENST00000429598 854 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 DNAJA1P5-201ENST00000440278 943 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 MTATP6P14-201ENST00000455189 673 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 RPS23P6-201ENST00000466136 431 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 TRAV31-201ENST00000502780 342 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC016550.1-201ENST00000505348 785 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 DUTP7-201ENST00000507982 486 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC111000.6-201ENST00000514471 709 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 HNRNPRP2-201ENST00000528421 743 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC106785.3-201ENST00000564064 847 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms